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Name : Rmag_0667 (Rmag_0667) Accession : YP_903880.1 Strain : Candidatus Ruthia magnifica Cm Genome accession: NC_008610 Putative virulence/resistance : Unknown Product : primary replicative DNA helicase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0305 EC number : 3.6.1.- Position : 713503 - 714948 bp Length : 1446 bp Strand : + Note : TIGRFAM: replicative DNA helicase; PFAM: DnaB domain protein helicase, N-terminal domain protein; DnaB domain protein helicase, C-terminal domain protein; KEGG: noc:Noc_0223 DnaB helicase DNA sequence : ATGAATACCAAAAACGTCAAAATACCACCCAATTCAATTGAATCAGAACAATCTGTTTTAGGTGGCTTATTGCTACACAA TGAAGCATGGGATCGTGTCGCAGATATTTTGACCGAGGCAGATTTTTACAATGCCTCGCATAGAATTATTTTTAATGCCA TTACCATTCTATTACAACACGAGCAACCTGCTGACATTCTCACAGTTAAAGAACAAGTTAAAAAAATAGGCTCTGAAGAA ACCATTGGTGGCTTTGTCTATTTAGCTCAAATTGCTGAAAATACCCCTAGTATTTCTAACATTGAAGCATATGCTAAACA CGTACGCGAATTATCCGTTTATCGTCAACTGATTGTTGTTAGTCACGAAATTGCTGACACTGCCTATCATCCAAAAGAAA TTGAAGTTCAGGAGCTTATTGATTTTTCTGAGAAAAAAATATTTGAAATTGCTGAACAAGTGACTCGTGGAAAACAAAAC ATTACTAATGTAAGAGACATTATTAAAGATGTTGTCAATCACGTACACGAAATGCAAGAATCTAGCAGCATAAGTGGTTT AGAAACTGGTTTTAGTGAATTAGATAAATTAACTTCTGGCTTACAAAATGGCGATTTAATTATCATTGCTGGACGCCCTT CTATGGGTAAAACTGCTCTTTCAATGAACATTATTGAGCACGTTGCTATTACTGCTAAAGAACCTAAACCAGTCGTAGTA TTTAGTTTAGAGATGCCAACTGAACAGTTAGTAATGCGTATGATTTCATCATTTGGTCACATTGAAGGCTCAAAATTACG CAATACTATGACTGAAACTGACTGGAATAGCTTTAATCATGCCGTATTAGCCTTGGAAAAATCTACAGTTCTTATTGATG AAACCCCTTCCATTACACCAACAGAAATTCGCGCAAAATGTCGGCGACTAAAACGCCAATATCCTGACTTGGCACTAATT ATGGTAGATTACTTACAACTGATGACCGTACATGGAAAAAATGAAAATAGGGTACAAGAAATCTCTGAAATTTCCCGTTC TCTTAAAGCCTTAGCCAAAGAAATTAACATACCCGTACTTGCTTTGTCACAACTTAACCGTGCTGTTGAATCACGCCCCA AGGCTGGTAAAGGTCGTATACCACAAATGTCTGATTTACGCGAATCAGGTTCAATTGAACAAGATGCTGATATTATTGGT TTTATTTATCGCGACCAACAATATCATGATGACACCTATTCAAATCCAGAAGAGGTAGGTAAGGCAGATTTAAAAATTGC CAAGCATAGGAACGGCGCTACTGGACTAATCAAACTAGCTTTTATTGGCGAATATGCACGATTTGAAAATTTAGCCAACG AAGAGCAATTTCACGACATAACTGATGAACAAATAGACACAGTTTATGCACATAATATGGCTAATTTTGACCAAGAGCCT TTTTAA Protein sequence : MNTKNVKIPPNSIESEQSVLGGLLLHNEAWDRVADILTEADFYNASHRIIFNAITILLQHEQPADILTVKEQVKKIGSEE TIGGFVYLAQIAENTPSISNIEAYAKHVRELSVYRQLIVVSHEIADTAYHPKEIEVQELIDFSEKKIFEIAEQVTRGKQN ITNVRDIIKDVVNHVHEMQESSSISGLETGFSELDKLTSGLQNGDLIIIAGRPSMGKTALSMNIIEHVAITAKEPKPVVV FSLEMPTEQLVMRMISSFGHIEGSKLRNTMTETDWNSFNHAVLALEKSTVLIDETPSITPTEIRAKCRRLKRQYPDLALI MVDYLQLMTVHGKNENRVQEISEISRSLKALAKEINIPVLALSQLNRAVESRPKAGKGRIPQMSDLRESGSIEQDADIIG FIYRDQQYHDDTYSNPEEVGKADLKIAKHRNGATGLIKLAFIGEYARFENLANEEQFHDITDEQIDTVYAHNMANFDQEP F |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | ABR13456.1 | replicative DNA helicase | Not tested | PAGI-5 | Protein | 1e-86 | 45 |
| api2 | CAF28476.1 | putative DNA binding protein with DNA-dependent ATPase activity | Not tested | YAPI | Protein | 4e-83 | 44 |
| dnaB2 | YP_001402701.1 | replicative DNA helicase | Not tested | YAPI | Protein | 1e-82 | 44 |
| dnaB | CAI36044.1 | replicative DNA helicase DnaB | Not tested | PPHGI-1 | Protein | 7e-74 | 43 |
| dnaB2 | YP_001007676.1 | putative DNA helicase | Not tested | YAPI | Protein | 1e-79 | 42 |
| PMI2640 | YP_002152342.1 | DNA helicase | Not tested | Not named | Protein | 4e-73 | 42 |
| STY4522 | NP_458617.1 | DNA helicase | Not tested | SPI-7 | Protein | 7e-79 | 42 |
| t4227 | NP_807829.1 | DNA helicase | Not tested | SPI-7 | Protein | 7e-79 | 42 |
