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Name : Rmag_0594 (Rmag_0594) Accession : YP_903816.1 Strain : Candidatus Ruthia magnifica Cm Genome accession: NC_008610 Putative virulence/resistance : Virulence Product : lysyl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG1190 EC number : - Position : 648690 - 650183 bp Length : 1494 bp Strand : - Note : TIGRFAM: lysyl-tRNA synthetase; PFAM: tRNA synthetase, class II (D, K and N); nucleic acid binding, OB-fold, tRNA/helicase-type; KEGG: tcx:Tcr_0726 lysyl-tRNA synthetase DNA sequence : GTGAGCGACCAAGATAATAACAAATTAATTATTGAAAGAAAATCAAAATTGGCTTTATTAAGAGAGGCTGGCAATCCATT TGTTAATAATTTTAAGCCTGAAAATTTAGCGCAAGATATTATTCAAAAATTTGATAGTTCTTCTAAAGAAGCGTTAGCGC AAAAAAACGTACAAGTATCTATAGCAGGTCGGATGATGCTCAAACGTGTGATGGGCAAAGCTAGTTTTGTCCATGTACAG GACTCTAGTGGACAAATTCAGCTTTTTATCACTCGTGATGAGTTGCCAGAAAATTTTTATAATGAGCAGTTTAAAAAATT GGATATTGGTGATATTGTTGGTGCTACAGGTGTTTTATTCAAAACCAGTGTAGGTGAACTATCAATTCGTATTAGTGATA TTAAATTATTAACCAAATCACTGCGCCCGTTGCCTGAAAAATTTCATGGACTGAGCGATCAAGAAACTCGTTATCGTCAG CGTTATGTTGATTTGATTATGAACAAGACGTCACGCAATACGTTTAAACGCCGTAGTCAAATTGTTAGCTATATTCGTAA TTTTTTTAATAATCATGATTTTATCGAGGTAGAAACACCTATGTTGCAAACTATTCCAGGTGGCGCAATAGCCAAATCAT TCGAGACTCATCATAATGCATTAGATATGCCTATGTATTTACGTATTGCACCTGAGCTTTATTTGAAGCGTTTAATTGTT GGCGGTATGGACAGGGTATTTGAAGTTAGTCGTAACTTTAGAAACGAAGGGCTTTCCACGAGGCACAATCCAGAATTCAC CATGATTGAATTTTACCAAGCCTATGCTACGTATCATGATTTAATGAATTTGACAGAAAAATTATTCCGCGGTATTGCGT TTGATGTCTATGGTAGCGCCAATATTCATTACCAAGGTAATGATTTTGATTTTTCAAAGCCATTTGAATGTATTAGTGTG TTTGATTCAATTTTACAATACAACCCAAATCTAACAGCAACCAATTTAAATCAGGACAACGCTAAAAAAATAGCAGAAAA ATTAGGTATTCAAGTCAAAGAAAATTGGGGCTTGGGCAAAATTCAAATCGAAATTTTCGAAGCTACTGTTGAAGAAAAGC TCATTCAACCTACTTTTATCACTGAATATCCAACTGAAGTATCACCACTAGCACGGTGCAATGACGATAACCCATTTATT ACTGATCGATTTGAATTGTTTATTGGTGGTCGTGAAATTGCCAATGGCTTTTCTGAATTAAATGATGCTGAAAATCAAGC TGAACGCTTTAAAAAACAAGTTGAAGAAAAAGATGCAAGCGATGATGAAGCCATGCAATATGACGCTGATTATATTCGTG CTCTAGAATATGGCATGCCGCCTACAGCAGGTGAGGGTATTGGCATTGATAGATTAGTAATGTTATTCACTAATTCACCA TCAATTCGTGACGTACTTCTGTTTCCACATATGCGCTCCGAAATTGGTAAGTAA Protein sequence : MSDQDNNKLIIERKSKLALLREAGNPFVNNFKPENLAQDIIQKFDSSSKEALAQKNVQVSIAGRMMLKRVMGKASFVHVQ DSSGQIQLFITRDELPENFYNEQFKKLDIGDIVGATGVLFKTSVGELSIRISDIKLLTKSLRPLPEKFHGLSDQETRYRQ RYVDLIMNKTSRNTFKRRSQIVSYIRNFFNNHDFIEVETPMLQTIPGGAIAKSFETHHNALDMPMYLRIAPELYLKRLIV GGMDRVFEVSRNFRNEGLSTRHNPEFTMIEFYQAYATYHDLMNLTEKLFRGIAFDVYGSANIHYQGNDFDFSKPFECISV FDSILQYNPNLTATNLNQDNAKKIAEKLGIQVKENWGLGKIQIEIFEATVEEKLIQPTFITEYPTEVSPLARCNDDNPFI TDRFELFIGGREIANGFSELNDAENQAERFKKQVEEKDASDDEAMQYDADYIRALEYGMPPTAGEGIGIDRLVMLFTNSP SIRDVLLFPHMRSEIGK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 5e-142 | 58 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Rmag_0594 | YP_903816.1 | lysyl-tRNA synthetase | VFG1668 | Protein | 3e-142 | 58 |
