Gene Information

Name : Rmag_0510 (Rmag_0510)
Accession : YP_903735.1
Strain : Candidatus Ruthia magnifica Cm
Genome accession: NC_008610
Putative virulence/resistance : Virulence
Product : single-strand binding protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0629
EC number : -
Position : 555356 - 555847 bp
Length : 492 bp
Strand : -
Note : TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n; KEGG: stt:t4237 single strand binding protein

DNA sequence : 
ATGGCAGGAATCAACAAAGTAATTTTAGTAGGCAATTTAGGCCAAGATGTAGAATTGAAATACACCTCTAATGGTAAAGC
AGTAACCACTTTATCTGTTGCAACCAGTGAAAGTTGGACAGACAAAAACACAGGGCAAAAGGTTGATAAAACTGAATGGC
ACCGTGTTAGTTTATTTGGCAAATTAGCTGAGATTGCTAGCCAATACCTACATAAGGGCTCTAAAGTTTACGTTGAAGGT
AATTTAAGAACACGTAAATGGCAAGACCAAACTGGTACTAACCGCTACACAACTGAAATAGTTGTTGGTTTTAATGGTAC
ATTACAAATGTTAGATCGTCACGACAATGTTGATATAGGTGGTGGTGCACCTCAAACTCAACAATCAGCATCTTCTACAC
CTGTACCACAACAACAAACCGCAACAGCGCCAGTCCTAGATCCTATCGCACCTGTTGATAATTCTGAGTTTGATGATGAC
ATTCCTTTTTAA

Protein sequence : 
MAGINKVILVGNLGQDVELKYTSNGKAVTTLSVATSESWTDKNTGQKVDKTEWHRVSLFGKLAEIASQYLHKGSKVYVEG
NLRTRKWQDQTGTNRYTTEIVVGFNGTLQMLDRHDNVDIGGGAPQTQQSASSTPVPQQQTATAPVLDPIAPVDNSEFDDD
IPF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ssB NP_458627.1 single strand binding protein Not tested SPI-7 Protein 1e-38 55
ssb NP_807839.1 single-stranded DNA-binding protein Not tested SPI-7 Protein 1e-38 55
ssb AAF14810.1 single strand binding protein Not tested SPI-7 Protein 8e-39 55
ssb1 YP_005176252.1 single-stranded DNA-binding protein Not tested ICEPmu1 Protein 6e-34 53
ssb AAC26638.1 single-strand binding protein Not tested SPI-4 Protein 4e-27 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Rmag_0510 YP_903735.1 single-strand binding protein VFG0576 Protein 2e-34 50