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Name : Ppro_0616 (Ppro_0616) Accession : YP_900305.1 Strain : Pelobacter propionicus DSM 2379 Genome accession: NC_008609 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : - Position : 653431 - 654699 bp Length : 1269 bp Strand : + Note : catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA DNA sequence : ATGCTCGACATGAAATTCATACGCGAAAATATCGATGAGACCGAGCGCCGCCTGGCCACGCGGGGCGAGTCCTGCACCCT GGGAGGTTTTCGCGAGCTGGACCAGAAACGCCTGGCCCTGCTCAAGGAGAGCGAGGCGCTCAAGGCGCTGCGCAATTCGG TTTCCGACGAGATAGCCCGCATCAAGGACAAGAGCCAGGCCCAGGACAAGATCCTGCAGATGCGCGAGGTCTCCCAGAAG ATCAAGGGAATGGACGATGAGCTGAAGCAGGTGGATGAAGCCTTGCAGGGCATCCTGCTGACTGTTCCAAATCTGCCGGA CCCTGCCACGCCGGTGGGTAAATCTGAAAACGATAACGTGGAGATAAGGAAATGGGGCACGCCGGGCAGCTACGGTTTTA CCCCCAAACCGCACTGGGAGATCGGCGAAGAGCTGGGCATCCTGGATTTCGAGTGCGGGGCCAAGCTGACCGGAGCGCGC TTCACCCTCTCCCGTGGCGCCGGCGCCCGCATGGAGCGGGCCCTGATCAGCTTTATGCTGGACCTGCATACCGCCAGCCA TGGCTACCTGGAGGTGCTGCCCCCCTTCATGGTTAACCGCGACAGCATGACCGGCACCGGCCAGCTGCCCAAGTTCGAGG AAGACCTGTTCAAGATGACCGATCCGGAGTACTTCCTGATCCCCACCGCCGAGGTGCCGGTAACCAACATCCACCGTGGC GAGATCCTGAAGAAGAGCGACCTTCCTATCCGCTATGCCGCCTATACCCCCTGCTTCCGCCGCGAGGCCGGCTCCTACGG CAAGGATACCCGCGGCCTGATCCGCCAGCACCAGTTCAACAAGGTGGAGCTGGTCAAGTTCTCCCACCCCTCCCAATCGG CGGAAGAACTGGAGAAGCTGACCGCCGATGCCGAGAAGGTGCTGCAACTGCTGGAGCTTCCCTACCGGGTCATGGCGCTC TGCAGCGCCGACATCGGCTTCTCCGCCGCCCGGACCTACGACCTGGAGGTCTGGCTGCCGGGGCAGAACTGCTACCGCGA GATCTCCTCCTGTAGCTGCTTTGGCGATTTCCAGGCCCGCCGCGCAAACATCCGCTTCCGCGAGGAGGAGAAGTCCAAGC CAGAGTTCGTCCACACCCTGAACGGCTCCGGTCTGGCGGTGGGACGCACCCTGGTGGCCATCCTGGAGAACTATCAGCAG GAGGACGGCTCGGTGGTCATCCCCCAGGCCTTGCGCCCCTACATGGGTGGCCTGGAGCGGATCCAGTAG Protein sequence : MLDMKFIRENIDETERRLATRGESCTLGGFRELDQKRLALLKESEALKALRNSVSDEIARIKDKSQAQDKILQMREVSQK IKGMDDELKQVDEALQGILLTVPNLPDPATPVGKSENDNVEIRKWGTPGSYGFTPKPHWEIGEELGILDFECGAKLTGAR FTLSRGAGARMERALISFMLDLHTASHGYLEVLPPFMVNRDSMTGTGQLPKFEEDLFKMTDPEYFLIPTAEVPVTNIHRG EILKKSDLPIRYAAYTPCFRREAGSYGKDTRGLIRQHQFNKVELVKFSHPSQSAEELEKLTADAEKVLQLLELPYRVMAL CSADIGFSAARTYDLEVWLPGQNCYREISSCSCFGDFQARRANIRFREEEKSKPEFVHTLNGSGLAVGRTLVAILENYQQ EDGSVVIPQALRPYMGGLERIQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 2e-115 | 59 |
