Gene Information

Name : Ppro_0534 (Ppro_0534)
Accession : YP_900223.1
Strain : Pelobacter propionicus DSM 2379
Genome accession: NC_008609
Putative virulence/resistance : Unknown
Product : replicative DNA helicase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0305
EC number : -
Position : 570917 - 572293 bp
Length : 1377 bp
Strand : +
Note : KEGG: gsu:GSU0998 replicative DNA helicase; TIGRFAM: replicative DNA helicase; PFAM: DnaB domain protein helicase, N-terminal domain protein; DnaB domain protein helicase, C-terminal domain protein; SMART: AAA ATPase

DNA sequence :
ATGACCAACCCCGATCTTCGCAAACTCCCCCCCCAGAGCCTGGAGGCTGAAATGTCCGTGCTGGGGGGCATCCTGATCGA
TAACGATGCCATCAACCGGGTGCTGGAAATCCTCGGCGCGGAAGACTTCTACCGCGAGAGCCACCGCAAGATCTTCCAGG
CCATGATGCGCCTCTCGGACCAGCGCGAGCCGTGCGACCTGATCACCATGACCGACATGCTCAAGAAGCAGGGTGAACTG
GAGGAGGTGGGGGGCGCCCCCTACCTGTTGACCCTGGTGGACTACGTTCCCACCGCGGCCAACATCGCCTACTACTGCAA
GATCGTGAAGGAAAAGGCGGTCAACCGTAAGCTGATCAGCGTGGCCACCGAGATCGTGACCCGGGGGTACGACGAGCAGG
CCGATATCAACGAACTGCTGGATCTGGCCCAGAAGAACATCTACGAGATCTCCGAGAACAAGCTGCGCCCCCAGTACGTG
CCGGTGCAGGCGGTGCTCAAGGAAGCCTTCACCATCCTGAAGACCCTGCACGACCGCAAGGAGCATGTCACCGGCGTGCC
CACCGGTTATGTGGACCTGGACCACATGACCGCCGGCTTCCAGCCCGGCGACCTGATTATCGTGGCCGCGCGCCCCTCCA
TGGGCAAGACCACCCTGGCGCTGAACGTGGCCGAATACGCTAGCGCCGATCCCCACAACAAGAAGAAGGTCCCCTCGGTG
ATCTTCTCCCTGGAGATGGGCAAGGAACAGCTGGTGATGCGTTTTTTGGCCTCCATCGCCAAGGTGGACTTCGGCAGGAT
GCGCACCGGCCACTTCCTGGATTCGGACTGGCCCCGCCTCACCAGGGCGGCCGGCATCCTGCACGACGCCAAGATATTCA
TCGACGACACGCCGGCCATCTCGGTGCTGGAGCTGCGCTCCAAGGCGCGGCGCCTGAAGAGCGAGCACGACATCGGCCTG
ATCATCATCGACTACCTGCAGCTGATGCGGGGGGGCGCCAACCCGGAATCCCGCCAGCAGGAGATCTCGGAGATCTCCCG
CTCCCTGAAGGCGCTGGCCAAGGAGCTGAACGTGCCGGTGATCGCCCTGTCCCAGCTCAACCGCGAACTGGAAAAGCGCG
CCGACAAGCGCCCCATGATGAGCGACCTGCGCGAGTCGGGCGCCATCGAACAGGATGCCGACGTGATCATGTTCGTCTAC
CGCGAATCGGTGTACTGCGAGCAGTGCCGCAAGCGGGACGGCACCTGCACCCAGAACCACGAACGCAACTCCGAGATCAT
CATCGGCAAGCAGCGTAACGGCGCCATCGGCACCGTCAACCTGGCCTTCTTCGGAGAGCACACCCGCTTCGAGAACCTGA
GCGCCCGGGAAGGCTGA

Protein sequence :
MTNPDLRKLPPQSLEAEMSVLGGILIDNDAINRVLEILGAEDFYRESHRKIFQAMMRLSDQREPCDLITMTDMLKKQGEL
EEVGGAPYLLTLVDYVPTAANIAYYCKIVKEKAVNRKLISVATEIVTRGYDEQADINELLDLAQKNIYEISENKLRPQYV
PVQAVLKEAFTILKTLHDRKEHVTGVPTGYVDLDHMTAGFQPGDLIIVAARPSMGKTTLALNVAEYASADPHNKKKVPSV
IFSLEMGKEQLVMRFLASIAKVDFGRMRTGHFLDSDWPRLTRAAGILHDAKIFIDDTPAISVLELRSKARRLKSEHDIGL
IIIDYLQLMRGGANPESRQQEISEISRSLKALAKELNVPVIALSQLNRELEKRADKRPMMSDLRESGAIEQDADVIMFVY
RESVYCEQCRKRDGTCTQNHERNSEIIIGKQRNGAIGTVNLAFFGEHTRFENLSAREG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABR13456.1 replicative DNA helicase Not tested PAGI-5 Protein 3e-79 44
PMI2640 YP_002152342.1 DNA helicase Not tested Not named Protein 6e-74 44
api2 CAF28476.1 putative DNA binding protein with DNA-dependent ATPase activity Not tested YAPI Protein 1e-79 44
dnaB2 YP_001402701.1 replicative DNA helicase Not tested YAPI Protein 2e-79 43
dnaB2 YP_001007676.1 putative DNA helicase Not tested YAPI Protein 3e-74 43
STY4522 NP_458617.1 DNA helicase Not tested SPI-7 Protein 1e-71 41
t4227 NP_807829.1 DNA helicase Not tested SPI-7 Protein 1e-71 41