Gene Information

Name : Ppro_3429 (Ppro_3429)
Accession : YP_903079.1
Strain : Pelobacter propionicus DSM 2379
Genome accession: NC_008609
Putative virulence/resistance : Virulence
Product : flagellar protein export ATPase FliI
Function : -
COG functional category : N : Cell motility
COG ID : COG1157
EC number : -
Position : 3791429 - 3792748 bp
Length : 1320 bp
Strand : +
Note : KEGG: gme:Gmet_3109 ATPase FliI/YscN; TIGRFAM: ATPase, FliI/YscN family; flagellar protein export ATPase FliI; PFAM: H+-transporting two-sector ATPase, alpha/beta subunit, central region; SMART: AAA ATPase

DNA sequence :
GTGCCCAAGTCATCCATTGATCTGGCAAAATACCGCTTTGCCGTGGAAAATGCGACCCCGATCAGATTGAATGGCAAGGT
TACCCAGGTGGTGGGACTCGTTATCGAGGGGTATTGTCCCGACACATCCGTCGGGGCTATTTGCGAGATTCGTCCACAGG
TGGGTGAACCGATCCCGGCCGAGGTAGTTGGTTTCCGCAACAACAAGACATTGCTGATGCCATTGGGGGAACTGAGGGGA
GTCGGGCTGGACAGCCTCATCTCCATCAGGAGAGAACAGGCTTCCATGGGAGTTGGTCCGCTCATGCTGGGGCGAGTCAT
CGATGGGCTTGGTAATCCGATCGATGATAGAGGTCCCCTGCACGTGGAGGAGGAGTATCCGATTTACGCGACGCCGGTCA
ATCCCATGACACGGCCTCCCATTCGCAAACCACTGGATCTGGGCATCAGGAGCATAAACGGGTTGCTGACCTGCGGTCAA
GGGCAGCGTGTCGGAATTATGGCTGGTTCAGGTGTCGGTAAGTCGACACTGCTGGGCATGATTGCACGCTATACCGAGGC
GGATGTGAACGTGATCGCCCTTATCGGTGAACGGGGACGAGAATTACGCGAGTTCATCGAGAAGGATCTTCAGGAGATTG
GCCTCAAGAAATCCGTTGTCGTGGTGGCCACCTCTGATCAACCTCCACTGGTACGTATGCGTGGCGCCTACATCGCCACA
ACCATTGCCGAATACTTTCAGAAACAGGGCAAGAAAGTGCTGCTCATGATGGACTCCGTGACACGGTTTGCCATGGCCAT
GCGCGAAGTTGGACTTGCCATCGGTGAGCCACCTACCACCAAAGGGTACACACCGTCGGTATTCGCTGCCTTGCCGAAGC
TACTCGAACGCGCCGGAAATTTTACCGATGGCAGCATTACCGGTCTGTATACGGTTCTTGTGGAGGGTGATGACTTTAAC
GAACCGATTTCCGATGCCGTGCGGAGTATCCTTGACGGGCACATCGTTTTGACCCGCAACCTGGCTTCCCGCAACATCTA
CCCACCCATCGATATTCTGGCTAGTGCCAGCAGGGTCATGAACGATGTGACCGTTACCGATCACCAGGAACTGGTCGGCA
AGTTCAAGGAGGCGATGGCCACATACCGTCAGTCCGAAGACCTCATCAATATCGGTGCGTACAAATCAGGCAGCAACCCA
GGCATAGATTATGCAATATCAAAAATGGATGGAATGACAGCATACCTGAAACAGGCTGTGCGAGACCCGGCTAATCTTCA
AGAATCCGTTGAGAGCTTGAAAGCTCTTTTTCAGGATTAA

Protein sequence :
MPKSSIDLAKYRFAVENATPIRLNGKVTQVVGLVIEGYCPDTSVGAICEIRPQVGEPIPAEVVGFRNNKTLLMPLGELRG
VGLDSLISIRREQASMGVGPLMLGRVIDGLGNPIDDRGPLHVEEEYPIYATPVNPMTRPPIRKPLDLGIRSINGLLTCGQ
GQRVGIMAGSGVGKSTLLGMIARYTEADVNVIALIGERGRELREFIEKDLQEIGLKKSVVVVATSDQPPLVRMRGAYIAT
TIAEYFQKQGKKVLLMMDSVTRFAMAMREVGLAIGEPPTTKGYTPSVFAALPKLLERAGNFTDGSITGLYTVLVEGDDFN
EPISDAVRSILDGHIVLTRNLASRNIYPPIDILASASRVMNDVTVTDHQELVGKFKEAMATYRQSEDLINIGAYKSGSNP
GIDYAISKMDGMTAYLKQAVRDPANLQESVESLKALFQD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
lscN AAO18044.1 LscN Virulence TTSS locus Protein 2e-107 51
hrcN AAP34339.1 HrcN Virulence Hrp PAI Protein 4e-92 49
hrcN YP_362163.1 type III secretion system ATPase Virulence Hrp PAI Protein 2e-91 49
hrcN NP_640767.1 type III secretion system ATPase Virulence Hrp PAI Protein 2e-91 49
hrcN YP_198730.1 type III secretion system ATPase Virulence Hrp PAI Protein 5e-92 49
hrpB6 AAB08461.1 HrpB6 Virulence Hrp PAI Protein 2e-91 49
hrpB6 BAB07852.1 HrpB6 Virulence Hrp PAI Protein 4e-92 49
hrpB6 AAF61281.1 HrpB6 Virulence Hrp PAI Protein 4e-92 49
escN YP_003223475.1 translocator EscN Virulence LEE Protein 7e-86 48
escN CAC81862.1 EscN protein Virulence LEE II Protein 7e-86 48
escN CAI43874.1 EscN protein Virulence LEE Protein 5e-86 48
escN AAK26715.1 EscN Virulence LEE Protein 2e-86 48
escN AAL57542.1 EscN Virulence LEE Protein 2e-86 48
escN YP_003236088.1 translocator EscN Virulence LEE Protein 2e-85 48
escN AAC38383.1 EscN Virulence LEE Protein 3e-85 48
escN NP_290268.1 hypothetical protein Virulence LEE Protein 2e-85 48
ECs4568 NP_312595.1 EscN Virulence LEE Protein 2e-85 48
escN AAC31513.1 L0034 Virulence LEE Protein 1e-85 48
escN YP_003232153.1 T3SS structure protein EscN Virulence LEE Protein 8e-86 48
unnamed ACU09458.1 type III secretion apparatus H+-transporting two-sector ATPase Virulence LEE Protein 1e-85 48
XC_3006 YP_244074.1 type III secretion system ATPase Virulence Hrp PAI Protein 3e-91 48
hrcN NP_636610.1 type III secretion system ATPase Virulence Hrp PAI Protein 3e-91 48
unnamed AAL06369.1 EscN Virulence LEE Protein 2e-85 48
YPO0267 YP_002345348.1 type III secretion system ATPase Virulence Not named Protein 4e-80 48
escN AFO66300.1 putative LEE-encoded type III secretion system ATPase Virulence SESS LEE Protein 3e-84 47
escN AFO66415.1 putative LEE-encoded type III secretion system ATPase Virulence SESS LEE Protein 3e-84 47
ssaN NP_456113.1 putative type III secretion ATP synthase Virulence SPI-2 Protein 1e-82 46
ssaN NP_805086.1 type III secretion system ATPase Virulence SPI-2 Protein 1e-82 46
ssaN CAA70537.1 secretion system apparatus Virulence SPI-2 Protein 1e-83 46
ssaN YP_216423.1 type III secretion system ATPase Virulence SPI-2 Protein 7e-83 46
ssaN NP_460380.1 type III secretion system ATPase Virulence SPI-2 Protein 2e-83 46
hrcN AAG33879.1 HrcN Virulence Hrp PAI Protein 2e-75 45
hrcN AAT96339.1 HrcN Virulence S-PAI Protein 7e-83 45
hrcN AAT96258.1 HrcN Virulence S-PAI Protein 1e-82 45
hrcN AAT96299.1 HrcN Virulence S-PAI Protein 9e-83 45
hrcN NP_791227.1 type III secretion cytoplasmic ATPase HrcN Virulence Hrp PAI Protein 4e-78 45
hrcN AAR25633.1 type III secretion cytoplasmic ATPase HrcN Not tested Not named Protein 9e-71 44
hrcN AAT96195.1 HrcN Virulence T-PAI Protein 1e-78 44
hrcN AAT96141.1 HrcN Virulence T-PAI Protein 1e-78 44
hrcN AAB06001.1 HrcN Virulence Hrp PAI Protein 2e-76 44
hrcN ABQ88354.1 HrcN Virulence Hrp PAI Protein 3e-72 43
hrpJ4 AAA81942.1 HrpJ4 Virulence Hrp PAI Protein 3e-72 43
hrcN ABA47275.1 HrcN Virulence S-PAI Protein 1e-86 43
ECs3730 NP_311757.1 ATP synthase SpaL Not tested LIM Protein 6e-71 43
invC AAS66861.1 InvC Not tested SSR-2 Protein 3e-71 41
invC YP_217813.1 ATP synthase SpaL Virulence SPI-1 Protein 6e-66 41
spaI NP_457288.1 secretory apparatus ATP synthase (associated with virulence) Virulence SPI-1 Protein 6e-66 41
spaI NP_806497.1 ATP synthase SpaL Virulence SPI-1 Protein 6e-66 41
invC NP_461815.1 ATP synthase SpaL Virulence SPI-1 Protein 6e-66 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Ppro_3429 YP_903079.1 flagellar protein export ATPase FliI VFG2144 Protein 2e-108 53
Ppro_3429 YP_903079.1 flagellar protein export ATPase FliI VFG0048 Protein 2e-105 52
Ppro_3429 YP_903079.1 flagellar protein export ATPase FliI VFG0390 Protein 9e-105 51
Ppro_3429 YP_903079.1 flagellar protein export ATPase FliI VFG0192 Protein 8e-109 50
Ppro_3429 YP_903079.1 flagellar protein export ATPase FliI VFG1254 Protein 6e-97 49
Ppro_3429 YP_903079.1 flagellar protein export ATPase FliI VFG2499 Protein 1e-92 49
Ppro_3429 YP_903079.1 flagellar protein export ATPase FliI VFG0730 Protein 2e-85 48
Ppro_3429 YP_903079.1 flagellar protein export ATPase FliI VFG0812 Protein 8e-86 48
Ppro_3429 YP_903079.1 flagellar protein export ATPase FliI VFG2331 Protein 1e-85 47
Ppro_3429 YP_903079.1 flagellar protein export ATPase FliI VFG0515 Protein 9e-84 46
Ppro_3429 YP_903079.1 flagellar protein export ATPase FliI VFG1008 Protein 9e-70 42
Ppro_3429 YP_903079.1 flagellar protein export ATPase FliI VFG1778 Protein 8e-69 42
Ppro_3429 YP_903079.1 flagellar protein export ATPase FliI VFG0555 Protein 2e-66 41