Gene Information

Name : Ppro_2855 (Ppro_2855)
Accession : YP_902511.1
Strain : Pelobacter propionicus DSM 2379
Genome accession: NC_008609
Putative virulence/resistance : Unknown
Product : IstB ATP binding domain-containing protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1484
EC number : -
Position : 3125454 - 3126230 bp
Length : 777 bp
Strand : +
Note : PFAM: IstB domain protein ATP-binding protein; SMART: AAA ATPase; KEGG: chy:CHY_1116 ISChy4, transposition helper protein

DNA sequence :
ATGGAACAGCTGACCTATGAGCGCCTCCAGGACAACCTGAAACGACTGAAACTCTTCAAGGCGGTGGAAATCCTTGACGA
TGTCGCCACCATCACCCAGAGCGACGGGAGCTCTCACCTTGCTTTCCTTGACCGGCTCCTGGAGGAAGAAGTGGCGGCAA
AGGACAAGCGCCGTGTGGATACCGCCATGAAGATCGCCGGTCTTCCCATGGCCAAAACCATCGAGGAGTACGACTTCACC
TTCCATCCCCATCTGGACAAGAAAGCGGTGATGGAACTCTTCGATCTGACCTTTCTGGCCAAACACGAAAATGTCATCTT
CCTGGGACCGCCGGGAGTGGGTAAGACCCACCTCGCCATCGCCCTGGCAATCAAGGCCTGCTATCACGGCTTCAAGGTCT
ACTTCACCACCATGCACACCCTGATCGCCAAGCTGAAGGAGAGTCAGGCCAAGGGAAAGGCCTATCTCAACTCAAGTCTG
GTGATCGTCGATGAAGTCGGCTACCTACCGGTCAACAACCAGGAAGCCTACCTCTTCTTCCAGTTCATCTCCTATCGTTA
CGAGAAAAGCTCGACCATCATCACCTCCAACAAGAGCTTCTCCGATTGGCAGGAACTCTTCGGAGACCAGGTCATTGCTT
CGGCCATCCTGGACCGCCTGCTTCACCACAGCAAGGTGGTCAACATCAAAGGGCACAGCTACCGGTTACAGGGACATGCC
TTCGCCAAGCAACTCTCTCAGAAAGGAGGTGAATCCATTTCAACAACACCTGATTGA

Protein sequence :
MEQLTYERLQDNLKRLKLFKAVEILDDVATITQSDGSSHLAFLDRLLEEEVAAKDKRRVDTAMKIAGLPMAKTIEEYDFT
FHPHLDKKAVMELFDLTFLAKHENVIFLGPPGVGKTHLAIALAIKACYHGFKVYFTTMHTLIAKLKESQAKGKAYLNSSL
VIVDEVGYLPVNNQEAYLFFQFISYRYEKSSTIITSNKSFSDWQELFGDQVIASAILDRLLHHSKVVNIKGHSYRLQGHA
FAKQLSQKGGESISTTPD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAB46598.1 IS100 transposase Not tested HPI Protein 6e-42 43
s0036 CAD33774.1 ORF B protein Not tested PAI I 536 Protein 6e-42 43
y1093 CAD42087.1 OrfB protein of IS100 transposase Not tested PAI II 536 Protein 6e-42 43
YPTB1586 YP_070114.1 transposase/IS protein Not tested HPI Protein 8e-42 43
orfB CAE85183.1 OrfB protein, transposase, IS100 Not tested PAI V 536 Protein 6e-42 43
unnamed CAA21402.1 - Not tested HPI Protein 8e-42 43
api84 CAF28558.1 putative transposase Not tested YAPI Protein 6e-42 43
y1093 CAC43411.1 IS100 transposase; transposase ORFA Not tested PAI III 536 Protein 6e-42 43
aec58 AAW51741.1 Aec58 Not tested AGI-3 Protein 1e-41 43
YPO1901 YP_002346891.1 transposase/IS protein Not tested HPI Protein 7e-42 43
y2410 NP_669717.1 transposase/IS protein Not tested HPI Protein 7e-42 43
y1093 CAD66188.1 transposase Orf B, insertion element IS100 Not tested PAI III 536 Protein 1e-41 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Ppro_2855 YP_902511.1 IstB ATP binding domain-containing protein VFG1515 Protein 3e-42 43
Ppro_2855 YP_902511.1 IstB ATP binding domain-containing protein VFG1627 Protein 3e-42 43
Ppro_2855 YP_902511.1 IstB ATP binding domain-containing protein VFG1606 Protein 3e-42 43
Ppro_2855 YP_902511.1 IstB ATP binding domain-containing protein VFG1663 Protein 7e-42 42