Gene Information

Name : Ppro_2440 (Ppro_2440)
Accession : YP_902103.1
Strain : Pelobacter propionicus DSM 2379
Genome accession: NC_008609
Putative virulence/resistance : Virulence
Product : NAD-dependent epimerase/dehydratase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0451
EC number : -
Position : 2638275 - 2639363 bp
Length : 1089 bp
Strand : -
Note : PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; Male sterility C-terminal domain; KEGG: tbd:Tbd_0099 NAD-dependent epimerase/dehydratase

DNA sequence :
ATGAACCGCTACGATATCGTACGAGAACAGCTGAAACAGAATCCCCGAACCTGGCTGGTGACGGGAGTGGCCGGCTTCAT
CGGCTCCAACCTGCTGGAGAGCCTGCTTACGCTTGGCCAGCGGGTGGTGGGGCTGGACAACTTCTCCACCGGCAAGCGCG
CCAACCTGGATGAAGTCAGCCGGGTGGTGACGCCGCGGCAGTGGGCTGCCTTCACCTTCCATGAAGGGGATATCCGCGAG
CTCGCCGCCTGCCGCGCCGCCTGTCAGGGGGTCGACTATATCCTGCACGAGGCTGCCCTCGGTTCGGTGCCCCGCTCCAT
CGAGGACCCGATCAGCAGCAACGAGAGCAATGTCGGCGGATTCCTGAACATGCTGGTGGCTGCCCGGGATGCCAAGGTGC
GGCGAATGGTCTACGCGGCCAGCAGTTCCACCTATGGCGACCACCCCGGCCTGCCCAAGCGGGAGGAGCTGATCGGCAGG
CCGCTCTCCCCCTACGCGGTCACCAAGTACGTGAACGAACTGTACGCCGATGTTTTTGCCCGGACCTATGCCATGGAACT
GGTAGGGCTGCGCTACTTCAACGTCTTCGGCCCGCGCCAGGACCCGGAAGGGGCCTATGCGGCGGTGATCCCGCGCTGGA
TCAGGTCCATGATCATCGACGAGACCGTGTATATCAACGGCAGCGGAGAGACGAGCAGGGATTTCTGCTTCGTGGAGAAC
GTGATCCAGATGAACCTGCTGGCAGCCACGGCTGATGAACCGCAGGCGGTCAACCAGGTGTACAACACCGCGGTCAACGC
CCGCACCACCCTGAATGAGCTCTACGACATGCTTCGGCAGCGACTCGTCCCCCGTTTCCCCCATCTTGCCCATCGCACGC
CGCTGCACCGGGATTTCCGGGCAGGGGACGTGCTGCATTCCCAGGCCGATATTTCCAAGGCTGCCCGGCTTCTGGGGTAT
CAGCCGACCCACACCATCCAGAGCGGGCTGGACGCCTCTCTATCGTGGTACGTGGATAACCTCTGCCCCACGGTGGAGGG
GAACTTGCCCGCTGCCGGGTCACGGGGCCTGGAGCCCGTGGGGAACTGA

Protein sequence :
MNRYDIVREQLKQNPRTWLVTGVAGFIGSNLLESLLTLGQRVVGLDNFSTGKRANLDEVSRVVTPRQWAAFTFHEGDIRE
LAACRAACQGVDYILHEAALGSVPRSIEDPISSNESNVGGFLNMLVAARDAKVRRMVYAASSSTYGDHPGLPKREELIGR
PLSPYAVTKYVNELYADVFARTYAMELVGLRYFNVFGPRQDPEGAYAAVIPRWIRSMIIDETVYINGSGETSRDFCFVEN
VIQMNLLAATADEPQAVNQVYNTAVNARTTLNELYDMLRQRLVPRFPHLAHRTPLHRDFRAGDVLHSQADISKAARLLGY
QPTHTIQSGLDASLSWYVDNLCPTVEGNLPAAGSRGLEPVGN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tviC NP_458739.1 Vi polysaccharide biosynthesis protein, epimerase Virulence SPI-7 Protein 2e-103 61
tviC NP_807944.1 VI polysaccharide biosynthesis epimerase Virulence SPI-7 Protein 2e-103 61

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Ppro_2440 YP_902103.1 NAD-dependent epimerase/dehydratase VFG0430 Protein 1e-103 61