Gene Information

Name : rph (Ppro_2311)
Accession : YP_901976.1
Strain : Pelobacter propionicus DSM 2379
Genome accession: NC_008609
Putative virulence/resistance : Unknown
Product : ribonuclease PH
Function : -
COG functional category : J : Translation, ribosomal structure and biogenesis
COG ID : COG0689
EC number : -
Position : 2493663 - 2494382 bp
Length : 720 bp
Strand : -
Note : RNase PH; tRNA nucleotidyltransferase; forms hexamers in Bacillus subtilis; phosphoroltic 3'-5' exoribonuclease; involved in maturation of tRNA precursors and removes terminal nucleotides near CCA acceptor arms of mature tRNAs

DNA sequence :
ATGGTGCGGAAAAACGGAAGGGACAGTCGGGCATTGCGGCCGGTTGCCATAACCAGAAACTTTACCAAGTATGCCGAGGG
GGCGGTTCTGGTGGAGTTCGGTGATACCAGGGTGATCTGTACCGCCTCGGTTGAGGAATCGGTGCCCTCCTTTTTGCGCG
GCAGGGGAACCGGGTGGGTGACCGCCGAGTATTCCATGCTGCCGCGGGCAACCCATACCCGTTCGTCCCGCGAAGCTTCC
AAGGGAAAACAGAGCGGCCGCACGCTGGAAATCCAGCGCCTGATCGGCCGCTCGCTGCGGGCGGTCACCGATCTGGCGGC
ACTGGGTGAGCGGAGTGTCTATCTCGACTGCGATGTGCTCCAGGCCGATGGCGGCACCAGAACAGCTTCCATAACCGGCG
CCTACGTGGCGCTGGCCGATGCCCTGGCAACACTGAAGCAGCGGGGGCTCTTGGAGCGGATCCCGCTCAGGGAGGCTGTT
GCGGCGGTGAGCGTGGGTATCGTGGGGGGAGAGAGCCTGCTGGACCTGGATTACGACGAGGACTCCTCAGCCGAGGTGGA
CATGAATTTCGTCATGACTTCCAGTCAGCGTTTCGTCGAGGTGCAGGGGACCGCTGAGGTGGAGCCGTTCACCCTTGAGC
AGATGGACGCCATGCGCAGTCTGGCCATGGACGGCATTCAGTGTCTGTTCGATCTTCAGCGGGAGGCGCTCAAGGGATGA

Protein sequence :
MVRKNGRDSRALRPVAITRNFTKYAEGAVLVEFGDTRVICTASVEESVPSFLRGRGTGWVTAEYSMLPRATHTRSSREAS
KGKQSGRTLEIQRLIGRSLRAVTDLAALGERSVYLDCDVLQADGGTRTASITGAYVALADALATLKQRGLLERIPLREAV
AAVSVGIVGGESLLDLDYDEDSSAEVDMNFVMTSSQRFVEVQGTAEVEPFTLEQMDAMRSLAMDGIQCLFDLQREALKG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rph YP_001800860.1 ribonuclease PH Not tested Not named Protein 4e-52 59