Gene Information

Name : Ppro_0216 (Ppro_0216)
Accession : YP_899910.1
Strain : Pelobacter propionicus DSM 2379
Genome accession: NC_008609
Putative virulence/resistance : Virulence
Product : DNA repair protein RadC
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2003
EC number : -
Position : 211797 - 212288 bp
Length : 492 bp
Strand : +
Note : PFAM: DNA repair protein RadC; KEGG: gsu:GSU2168 DNA repair protein RadC

DNA sequence :
ATGAATTTTAATCTCTTCGGTGAACCGGTACCGCCGGTCACTAAACGAATCATGGTGCGCTCAATTGAGGCCCGCTACAG
AAACGAAGTCGTGCGCGACGATGCTCCGGAATGGGTATCGATGCGCTTCACGAAACCAGAGCAGGTCTATGAGATGTTCC
GGGATCTCCGGCGTGAGACGAAGGAGCATTTTGTGGTGTTGCATCTCGACGGCAAGAACCGGATCGTCTGTTTTGACCGG
GTCTCCATCGGTTCGCTCAACCAGGCCATCGTTCATCCCCGGGAGGTGTTCAAGACGGCATGCCTGTCGAATGCGGCAGC
CATTCTGCTTGTTCACAACCATCCGACCGGAGATCCGAACCCCAGCAGCGAAGATATCGCCATCACCAAGCGTCTCAAGG
AGAGCGGCGACATCCTCGGCATCCGGGTACTGGATCACATAATCGTCGGTGATGACGAGTTCCTGAGTTTTGTCGAGCGG
GGACTTTTATAA

Protein sequence :
MNFNLFGEPVPPVTKRIMVRSIEARYRNEVVRDDAPEWVSMRFTKPEQVYEMFRDLRRETKEHFVVLHLDGKNRIVCFDR
VSIGSLNQAIVHPREVFKTACLSNAAAILLVHNHPTGDPNPSSEDIAITKRLKESGDILGIRVLDHIIVGDDEFLSFVER
GLL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC1786 NP_231421.1 DNA repair protein RadC Not tested VPI-2 Protein 5e-16 46
VC0395_A1383 YP_001217326.1 DNA repair protein RadC Not tested VPI-2 Protein 5e-16 46
VPI2_0034 ACA01849.1 DNA repair protein RadC Not tested VPI-2 Protein 3e-16 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Ppro_0216 YP_899910.1 DNA repair protein RadC VFG1119 Protein 2e-16 46