Gene Information

Name : Ppro_1830 (Ppro_1830)
Accession : YP_901500.1
Strain : Pelobacter propionicus DSM 2379
Genome accession: NC_008609
Putative virulence/resistance : Resistance
Product : cystathionine gamma-synthase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0626
EC number : -
Position : 1970002 - 1971153 bp
Length : 1152 bp
Strand : +
Note : PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent enzymes; KEGG: gme:Gmet_0698 Cys/Met metabolism pyridoxal-phosphate-dependent enzyme

DNA sequence :
ATGAACATCGATACGCAGGCGGTCCAGACCGGACTGGAGTGGGACACGCGAACAGGGGCGCTCTCGATCCCCATCTACCA
GTCAGCCACCTTCCGGCATCCGGGGCTTGGCCAGAGCACCGGCTTCGACTACAGCCGCTCGGGCAACCCCACCCGCCTGG
CGCTGGAGCAGGGCATCGCCCGCATGGACGGCGGCTCCAGGGGCTTCGCCTTTTCCTCGGGCATGGCGGCCATCACCAGC
CTGCTGCTGCTCTTTCAGGAGGGGGATCACCTGGTGGTCACCGAAGACCTGTACGGCGGAACCTGTCGCCTGTTCGACAG
GATCTTCACCCGCTTCGGCCTCTCCTTCAGCTATGTGGATACCACCGACAGGGAGGAGGTGCTGGCGGCCATAACCCCTT
CCACCAAGGCGCTGTTCGTGGAGACGCTCACCAACCCGCTGCTTAAATTCGCCGACATCCCTGCCCTCTCCACCATCTGC
CACGAGCGGGGACTGCTGCTGATCGCCGACAACACCTTCCTGACCCCCTACCTGCTGCGTCCCCTGGAACGTGGGGCCGA
CATCACCGTCTACAGTGCCACCAAGTATCTGTCGGGCCACAACGACACGGTGGCCGGCCTGGCGGTTGTCAGGGATCCGC
AGTTGGCCGAACAGGTCTACTTCCACCAGAACTCGGCCGGGGCCGTGCTGGGACCACAGGACTCCTGGCTGGTGATCCGC
GGCATGAAGACTCTGGGGGTGCGCCTTGACCGGCAGCAGGAAAACGCCCTGAAGATCGCCCGCTGGCTGCAACGGCACCC
CCAGGTCACCAGGGTCCATTACCCCGGCCTGGAGGAGCACCCCGATCATGATCTGATCAGGCGCCATGCCCGGGGCTTCG
GCGCCATGATCGCCTTCGAGGTCGAAAGCCACAGCCTGGTGGAGCAGCTCCTGCTCAGGACCCAGCTGATCTCCTTTGCC
GAAAGCCTGGGTGGGGTGGAAACTCTGATGACCTTCCCCGAGGGGCAGACCCATGCGGACATTCCGCCGGAACTGCGTGC
CCGACTGGGCATCAACGACGTGCTGCTGCGCCTTTCGGTGGGCATCGAGAATGTTGACGATCTGATCGACGACCTGAACC
AGGCATTCAACAAGAGGGAGACAACCGTATGA

Protein sequence :
MNIDTQAVQTGLEWDTRTGALSIPIYQSATFRHPGLGQSTGFDYSRSGNPTRLALEQGIARMDGGSRGFAFSSGMAAITS
LLLLFQEGDHLVVTEDLYGGTCRLFDRIFTRFGLSFSYVDTTDREEVLAAITPSTKALFVETLTNPLLKFADIPALSTIC
HERGLLLIADNTFLTPYLLRPLERGADITVYSATKYLSGHNDTVAGLAVVRDPQLAEQVYFHQNSAGAVLGPQDSWLVIR
GMKTLGVRLDRQQENALKIARWLQRHPQVTRVHYPGLEEHPDHDLIRRHARGFGAMIAFEVESHSLVEQLLLRTQLISFA
ESLGGVETLMTFPEGQTHADIPPELRARLGINDVLLRLSVGIENVDDLIDDLNQAFNKRETTV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAR0460 YP_039909.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 6e-84 47
SAS0418 YP_042545.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 7e-85 47
metB YP_281510.1 cystathionine beta-lyase Not tested Not named Protein 2e-66 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Ppro_1830 YP_901500.1 cystathionine gamma-synthase BAC0207 Protein 1e-57 41