|
Name : Ppro_1685 (Ppro_1685) Accession : YP_901356.1 Strain : Pelobacter propionicus DSM 2379 Genome accession: NC_008609 Putative virulence/resistance : Unknown Product : RNA-binding S1 domain-containing protein Function : - COG functional category : K : Transcription COG ID : COG2183 EC number : - Position : 1811015 - 1813186 bp Length : 2172 bp Strand : + Note : PFAM: RNA binding S1 domain protein; SMART: Resolvase, RNase H domain protein fold; KEGG: gsu:GSU0235 S1 RNA binding domain protein DNA sequence : ATGAAGCCGAATAATGAACAGCTTGCCAAGATCATTGAGTACATCATCGACGCCACCGGACTTGGACGCGGACAGGTGCA GAACTGCGTGGAACTGCTCCAGGGTGGCGCCACCGTGCCGTTCATCGCCCGCTACCGCAAGGAGATGACCGGCGAACTGG ACGAGGTGCGCATCCGTGACGTGGAGGAGCAGTACGTCTACTTCCGCGAACTGGGTGAGCGCAAGTTGACGGTGCTCAAT TCCATCGAGGAGCAGGGCAAGCTTACGCCGGAGTTGCGTCAACGCATCGAGGCATCGTCTAAAAAGACCGAGGTGGAGGA CCTCTACCTCCCCTTCAAGCCCAAACGCCGCACTAAGGCGATCATCGCCCGGGAGCGGGGACTGGAGCCGCTGGCGGACA TCATGGCGGCCCAGGAACTCTTCTCGGGGAGTCCCGAGGAGGCGGCTGTCCCCTTTGTTAACCCGGAGCTGGAGATCCCC GACGCGGCAGCGGCCCTGGAGGGGGCAGGCCATATCCTGGCCGAGCGGCTTTCCGATGATGCCGACAGTCGCGACATGGT ACGGCGCCTGACCGCCGAGCAGGGGGTGATCGTCTCACGAGTGGCGGCGGATAAGAAGGGGCAGGTCACCAAATTCGAGA TGTACTACGACTACCAGGAGTCGCTCAGGGAGGTTCCCTCCCACCGCATGCTGGCCATGCGGCGGGGCGAGAAGGAGGAG GTGCTCTACCTCTCCATCGTCGCGCCCCAGGAGCATATCCTGGTCGGCCTCAAGTCACGGCTGATCAGGGGGGAGAGCGT CTTCAGGCCGCTTCTGGAGCGGGTCGTAGAGGATGCCTACAAGCGGCTGATCGCCCCTTCCATCGAAGTGGAGTTGCGCC TGGATTCCAAGGAGCGCGCCGACGAGGCGGCCATCGCGGTGTTTGCCCAGAATCTGCGCAACCTCCTGCTGGCGCCCCCG GCCGGGGGTAAACGGGTGCTGGGCATCGACCCCGGCTTCCGCACCGGCTCCAAGCTGGCGGCCCTGGACGCTACCGGCCG TTTCATGGAGCATGTCACGATCTACCCCCACACGGGAGAGGCGCGTATTCACCAGGCCCGACAGGAGCTGCTGCGCCTGG TGGAGACCTTTGATATCGAGATGATCGCCGTGGGCAACGGCACCGCTGGCCGCGAGATGGAAATATTCAGCCGGGAGACC CTTGCCGGGGCAGGGTGGCAGATCCCGGTGGTGTCGGTCAGCGAGGCTGGGGCCAGCGTCTACTCCGCCTCGGAGATCGC CCGCGAGGAGTTCCCCGAACTGGACCTGACCGTGCGCGGGGCCATCTCCATCGGCCGGCGTCTGCAGGACCCCCTGGGCG AACTGGTCAAGATCGATCCCAAGAGTATCGGGGTGGGGCAGTACCAGCACGACGTCAACCAGTCAATGCTCAAGAAGGCG CTGGACGGCGTGGTGGAATCCTGTGTCAACTATGTGGGGGTCGATCTGAACACCGCCTCCTGGGCCCTGCTCTCCTATGT CTCTGGCCTGGGACCTTCCCTGGCCAAGGCGGTCACTCGTTACCGCGACCAGAATGGCCCCTTCTCCTCCCGCACTACAT TGATGAACGTCCCCCGCTTCGGCGCCAAGGCTTTCGAGCAGGCCGCCGGTTTCTTGAAAATCCGCAATGCAGGGCATCCG CTGGATAACAGCGCCGTCCACCCCGAGCGCTATGCCCTGGTGGAGTCCATGGCCCGGGACCTGGGTGTCTCCCTGGGACA CCTGGTGGCCGACCCGGCCCTGACAAAGCGCATCGACCCGAAGCGCTACCTGTCCGATGGCGTCGGCCTGCCGACTCTGA ACGACATCCTGGAGGAACTTATGAAACCGGGACGTGACCCTCGCAGCCAGTTCCAGACAGCCGAATTCCGTGATGACATC CGCAAGATCGAGGATCTGCGGGAGGGGATGGTGCTGCAGGGGGTGGTGACCAACGTGACCGCCTTCGGTGCCTTCGTGGA CATCGGCGTCCACCAGGATGGGTTGGTGCACATCAGCCATCTGGCCAACCGCTTTGTCAAGAGCCCCCATGACGCGGTCC AGGCCGGCCAACTGGTCAGGGTCAAGGTGCTTTCAGCCGACCCGAAGCGAAAGCGAATCTCCCTCTCTATCAGGGAGGCG GAGCGGAAGTGA Protein sequence : MKPNNEQLAKIIEYIIDATGLGRGQVQNCVELLQGGATVPFIARYRKEMTGELDEVRIRDVEEQYVYFRELGERKLTVLN SIEEQGKLTPELRQRIEASSKKTEVEDLYLPFKPKRRTKAIIARERGLEPLADIMAAQELFSGSPEEAAVPFVNPELEIP DAAAALEGAGHILAERLSDDADSRDMVRRLTAEQGVIVSRVAADKKGQVTKFEMYYDYQESLREVPSHRMLAMRRGEKEE VLYLSIVAPQEHILVGLKSRLIRGESVFRPLLERVVEDAYKRLIAPSIEVELRLDSKERADEAAIAVFAQNLRNLLLAPP AGGKRVLGIDPGFRTGSKLAALDATGRFMEHVTIYPHTGEARIHQARQELLRLVETFDIEMIAVGNGTAGREMEIFSRET LAGAGWQIPVVSVSEAGASVYSASEIAREEFPELDLTVRGAISIGRRLQDPLGELVKIDPKSIGVGQYQHDVNQSMLKKA LDGVVESCVNYVGVDLNTASWALLSYVSGLGPSLAKAVTRYRDQNGPFSSRTTLMNVPRFGAKAFEQAAGFLKIRNAGHP LDNSAVHPERYALVESMARDLGVSLGHLVADPALTKRIDPKRYLSDGVGLPTLNDILEELMKPGRDPRSQFQTAEFRDDI RKIEDLREGMVLQGVVTNVTAFGAFVDIGVHQDGLVHISHLANRFVKSPHDAVQAGQLVRVKVLSADPKRKRISLSIREA ERK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| NMB0075 | NP_273139.1 | transcriptional accessory protein Tex | Not tested | IHT-A | Protein | 3e-158 | 50 |
