Gene Information

Name : Ppro_1315 (Ppro_1315)
Accession : YP_900993.1
Strain : Pelobacter propionicus DSM 2379
Genome accession: NC_008609
Putative virulence/resistance : Unknown
Product : phage integrase family protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0582
EC number : -
Position : 1387579 - 1388715 bp
Length : 1137 bp
Strand : +
Note : PFAM: phage integrase family protein; KEGG: sat:SYN_01916 DNA integration/recombination/inversion protein

DNA sequence :
ATGCCAGCCGGGGGGAAGTGGTGGCGCTTCAAGTACCGCTTCGGCGGCAAGGAGAAATTACTTTCCTTCGGCACCTATCC
CGACATCTCCCTTGCGGAAGCGCAGGCGAAGAGGCACGAGGCGCGAAACCAGGTTGCCAACGGTATTGACCCCGGAGCTG
AACGCAAGGAGCTGAAGAGGGCGGAGCAGGAGCAACAGGAGATCGTCGAAAACAGCTTCAAGGTGGTCGCTCGCGAATGG
CACGGGAAGTTTTCCGGCCAATGGTCGCCGGGCCACTCCATGACTACCATGGACCGCTTGGAGCGGGACATATTCCCCTG
GCTGGGGAGCAAGCCAGTTGCTGATGTCAAGCCAGTTGACCTTTTGGCGGTACTGCGCCGGATAGAGGGGAGGGGGGCGC
TGGAGACGGCACACAGAGTCCGAACTATCTGTGGGCAGGTGCTGCGTTATGCTGTGGCTACCGGACGTGCTGAAAGGGAT
TCTGCGGCAGACCTGCGGGGTGCGTTGCCGCCGGTGCGGGAAAAACACCATGCGGCGCTGACCGACCCGAAGGAGGTGGC
CGACCTGCTGAGGGCCATTGATGGCTTCAAGGGAACCTTTCACGTTAAGTGCGCTTTGAAGCTCGCCCCTATGCTATTTG
TCCGTCCCGGCGAGTTGCGGCAAATGGAGTGGGCGGAGATCGACCTTGACGGCGCACAGTGGAACATCCCCGCCGAAAAG
ATGAAGATGAAGCAAGCCCATATCGTGTCGCTCTGCAAACAGGCCGTTGCGATCCTGAAAGAACTGCAGCCATTGACCGG
CGCGGGCCGCTATGTGTTCCTTTGTCACCGTTCACCACTGCGTCCCATGACCAACAATGCAATAAACGCGGCATTCCGTC
GTATGGGGTACACGTCCGATGAAATGACAGGCCACGGATTCCGGGCAATGGCGCGGACGATCCTTGACGAAGTTTTGCAG
GTCCGGCCTGACTTCGTCGAGCACCAACTTGCCCATGTCGTGCGTGATCCGAACGGTCGAGCCTACAACCGGACGGCGCA
TCTCAAAGAACGGCGGAAGATGATGCAGCTTTGGGCTGATTACCTTGATGGATTGAGGGTAGGGGCGAAGGTGATTCCAT
TACGGAATACATCATGA

Protein sequence :
MPAGGKWWRFKYRFGGKEKLLSFGTYPDISLAEAQAKRHEARNQVANGIDPGAERKELKRAEQEQQEIVENSFKVVAREW
HGKFSGQWSPGHSMTTMDRLERDIFPWLGSKPVADVKPVDLLAVLRRIEGRGALETAHRVRTICGQVLRYAVATGRAERD
SAADLRGALPPVREKHHAALTDPKEVADLLRAIDGFKGTFHVKCALKLAPMLFVRPGELRQMEWAEIDLDGAQWNIPAEK
MKMKQAHIVSLCKQAVAILKELQPLTGAGRYVFLCHRSPLRPMTNNAINAAFRRMGYTSDEMTGHGFRAMARTILDEVLQ
VRPDFVEHQLAHVVRDPNGRAYNRTAHLKERRKMMQLWADYLDGLRVGAKVIPLRNTS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ESA_03025 YP_001439090.1 hypothetical protein Not tested Not named Protein 4e-69 44
intL NP_290239.1 integrase for prophage 933L and the LEE pathogenicity island Not tested LEE Protein 3e-70 43
ECs4534 NP_312561.1 integrase Not tested LEE Protein 3e-70 43
int AAC31482.1 CP4-like integrase Not tested LEE Protein 2e-70 43
int ACU09430.1 integrase Not tested LEE Protein 2e-70 43
int AAD44730.1 Int Not tested SHI-2 Protein 2e-70 43
int CAC39282.1 integrase Not tested LPA Protein 6e-71 43
aec33 AAW51716.1 Int Not tested AGI-3 Protein 3e-71 43
SF3698 NP_709437.1 integrase Not tested SHI-2 Protein 8e-70 43
int AAD54663.1 Sai integrase Not tested SHI-2 Protein 6e-70 43
S4835 NP_839238.1 integrase Not tested SHI-2 Protein 8e-70 43
SESS1296_03598 AFO66301.1 bacteriophage integrase Not tested SESS LEE Protein 1e-63 42
SESS1635_03816 AFO66367.1 bacteriophage integrase Not tested SESS LEE Protein 1e-63 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Ppro_1315 YP_900993.1 phage integrase family protein VFG0783 Protein 1e-70 43
Ppro_1315 YP_900993.1 phage integrase family protein VFG0598 Protein 3e-70 43