Gene Information

Name : Ppro_1142 (Ppro_1142)
Accession : YP_900824.1
Strain : Pelobacter propionicus DSM 2379
Genome accession: NC_008609
Putative virulence/resistance : Unknown
Product : tyrosine recombinase XerD
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG4974
EC number : -
Position : 1189805 - 1190692 bp
Length : 888 bp
Strand : +
Note : TIGRFAM: tyrosine recombinase XerD; PFAM: phage integrase family protein; phage integrase domain protein SAM domain protein; KEGG: gme:Gmet_1427 tyrosine recombinase XerD

DNA sequence :
GTGAACGAGTACCTGGACCTATTCCTGGGCTACATCGCCGTGGAACGGGGGCTTGCGACCAACACCCGCCAGGCCTACAG
TCGCGATCTGGGGCGTTACCTCGATTTCCTGGCTGAGCGGGGGAAAAACGAGCCGGCCGAGGTGACGGCGGCCGATATCG
CCTCCTTTCTGGTAAGACTGAGAGATGAGGGGCTCGCCCCGGCCAGCAGGGCGCGCTGTCTGTCGGCCATCCGCATGTTC
CACAAGTTCCTGATGATCGAGAAGTACTGTGACGACAACCCGTCGGCCATACTCGAAGCGCCCCGCACCCTGCACAAGCT
GCCGGCATTCCTGGAGCCGGCGGAGGTGGACCGCCTGTTTTCCGCCTGCGCCGGGACGTCGGGGGAGGATCTGCGTGACC
GTGCCATGCTGGAGCTGCTCTACGCCACCGGGCTAAGGGTATCGGAACTGGTCACTATCACGCTGCGCCAGGTCAACCTT
GATGTGGGATACCTGATGGTTGTGGGCAAGGGGGACAAGGAGCGGCTGGTGCCCATCGGCGAGTCGGCCCGCGGGCGGGT
CAGAAGGTATATCGAGGAGGCCCGCTACCGCCTCGATCCCCAGGGGCGCACCCCCCATCTCTTCCTCTCCCGCCTGGGGG
ATGCCATGAGCCGCCAGGCCTTCTGGAACCTGATCAGGAAGCGGGCGAAACTCGCCGCAATCGCGAAGGATATTTCGCCC
CATACCCTGCGCCACTCCTTCGCCACCCACCTGCTGGAGAACGGCGCCGACCTGCGCAGCGTGCAGATCATGCTGGGCCA
TGCCGATCTCTCCAGCACCCAGATCTACACCCACGTCACCCGCGAGCGGTTGAAAAGGCTGCACCAGGAGATTCATCCCC
GGGGATGA

Protein sequence :
MNEYLDLFLGYIAVERGLATNTRQAYSRDLGRYLDFLAERGKNEPAEVTAADIASFLVRLRDEGLAPASRARCLSAIRMF
HKFLMIEKYCDDNPSAILEAPRTLHKLPAFLEPAEVDRLFSACAGTSGEDLRDRAMLELLYATGLRVSELVTITLRQVNL
DVGYLMVVGKGDKERLVPIGESARGRVRRYIEEARYRLDPQGRTPHLFLSRLGDAMSRQAFWNLIRKRAKLAAIAKDISP
HTLRHSFATHLLENGADLRSVQIMLGHADLSSTQIYTHVTRERLKRLHQEIHPRG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 5e-54 48
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 5e-54 48