Gene Information

Name : Ppro_1125 (Ppro_1125)
Accession : YP_900807.1
Strain : Pelobacter propionicus DSM 2379
Genome accession: NC_008609
Putative virulence/resistance : Virulence
Product : resolvase domain-containing protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1961
EC number : -
Position : 1166058 - 1166612 bp
Length : 555 bp
Strand : +
Note : PFAM: Resolvase, N-terminal domain; Resolvase helix-turn-helix domain protein; KEGG: neu:NE0751 site-specific recombinase

DNA sequence :
ATGAGCGGTCAGAGAATAGGCTATGTGAGGGTGTCCAGTATTGACCAAAACTGCGACAGGCAGCTTGACGGCATCGAACT
GGACCGAGTTTTCACCGATAAGGCATCAGGAAAAGACGTGAGCAGACCGGCACTCGCCGAGATGGTGCGCTTCGTGCGGG
AAGGGGATCGAATCGTTGTCCATTCGCTTGATCGTCTCGCCCGCAACCTGGATGACCTGAGAAAACTGGTATCCGATCTT
ACCGGGCGCGGTGTCACCGTCGAGTTCGTCAAAGAGAATCTTACCTTCTCTGGTGATGACTCGCCCATGTCAACCCTGCT
ACTATCCGTCATGGGGGCTTTCGCCGAGTTCGAGCGGGCGCTTATCAGGGAGCGTCAACGTGAAGGTATCGCCATCGCCA
AGCAGGCAGGAGCCTACAAGGGCCGCAAACGGGAAATGTCGGATGAGCGAATTGCCGAGATCAAGCGGCGGGTGGCCAAT
GGTGACAAGAAGGCCGCGATAGCCCGCGACATGGGAATCAGCCGGGAGACGGTTTACCAGTACCTCAGAAGTTGA

Protein sequence :
MSGQRIGYVRVSSIDQNCDRQLDGIELDRVFTDKASGKDVSRPALAEMVRFVREGDRIVVHSLDRLARNLDDLRKLVSDL
TGRGVTVEFVKENLTFSGDDSPMSTLLLSVMGAFAEFERALIRERQREGIAIAKQAGAYKGRKREMSDERIAEIKRRVAN
GDKKAAIARDMGISRETVYQYLRS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tnpR ACF06154.1 resolvase Not tested Tn5036-like Protein 3e-55 72
tnpR ACY75537.1 TnpR Not tested Tn6060 Protein 4e-53 69
tnpR AAL08439.1 resolvase TnpR Not tested SRL Protein 2e-56 68
tnpR YP_006098373.1 transposon Tn21 resolvase Not tested Tn2411 Protein 3e-56 68
tnpR AFV53121.1 Tn21 resolvase Not tested AbGRI2-1 Protein 2e-56 68
res YP_005124341.1 DNA-invertase Not tested Not named Protein 1e-24 52
resX ADZ05759.1 invertase/resolvase Not tested AbaR10 Protein 5e-10 42
resX ACN81037.1 partial invertase/resolvase Not tested AbaR5 Protein 2e-11 42
1_365 CAJ77091.1 Resolvase N-term Not tested AbaR1 Protein 1e-11 42
resX ADZ05753.1 invertase/resolvase Not tested AbaR10 Protein 1e-11 42
resX ADZ05809.1 invertase/resolvase Not tested AbaR20 Protein 1e-11 42
resX AGK36651.1 partial invertase/resolvase Not tested AbaR26 Protein 1e-11 42
ACICU_00231 YP_001844890.1 site-specific recombinase, DNA invertase Pin protein Not tested AbaR20 Protein 2e-11 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Ppro_1125 YP_900807.1 resolvase domain-containing protein VFG1030 Protein 8e-57 68