|
Name : Ppro_1064 (Ppro_1064) Accession : YP_900747.1 Strain : Pelobacter propionicus DSM 2379 Genome accession: NC_008609 Putative virulence/resistance : Virulence Product : DNA mismatch repair protein MutS Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0249 EC number : - Position : 1113914 - 1116526 bp Length : 2613 bp Strand : - Note : This protein performs the mismatch recognition step during the DNA repair process DNA sequence : ATGGCAGACCATACCCCCATGATGCGGCAGTACCTGGAGATCAAGTCCGGGTACCCCGATGCAGTCCTCTTCTTCCGCAT GGGGGATTTCTACGAGATGTTCCTGGACGACGCCCTGCTGGCGTCGCGCATCCTGGACATCACCCTGACCTCGCGCAACA AGGGGAGCGGCGACGAGATCCCGTTCTGTGGCGTCCCCTACCACTCCGTCACCCCCTACATCACCAAGCTGATCGAGAAC GGCCACAAGGTCGCCATCTGCGAACAGGTGGAAGACCCCAAGCAGACCAAGGGGATCGTGCGTCGCGAGGTGGTCAGGGT GATCACCCCCGGCCTGCTGATCGAGACCGAGAACCTCTCCCCGGACGACAACAACTACCTGCTGGCGCTGCATCAGGGAG CTGAGGAGCAGTGGGGGGTGGCCTGGCTGGACCTCTCCACCGGAGAGTTCCGGGTAACCGAACTTGCCGGTCCGGGGTCG GCCCTGGCCGAGGCGGTCTGCATCAATCCGGCCGAGGTGCTGCTGGCCGATGGTGTGCGACTGGAGGAATTCCCCGCCGA CCTGAAGGAATACCTGGCTCAGAAGATCGTTTCCCGCGCCCCGGCCTGGGTCTATGAGCGCGACTACACCTCGTCGCTGA TCTGCGATCAGTTCGGCGCCGCCTCCCCCGACGTGCTGGGGCTGGAGGGGCTCCCCTCGGGGCTTTTGGCCGCCGGCGCG GCCCTGTACTACCTGCGTGAAAACCGCAAGTCAGCCATCCCCCACATCCGCGACATCCGCGTCTACCAGCGCAGCGAGCA TCTTGCCCTGGACCCGGCCACCAGGCGCAACCTGGAGATCACCGCCAGCATGGCCGAGGGGAAGAAGAGCGGCTCCCTGC TGGGCTGCCTGGACCGCACCGTCACCGCCATGGGTGCCCGCCGCCTGAAGCAGTGGCTCGGCTATCCCCTGGTGGGGCTG GAGCCGATCCGCAGCCGCCTGGATGCGGTGGAGGAGCTGCTGGAGGGGGCAACCACCCGCGACGAGCTGGCCGCCCAGAT GAAGGGCATCGCCGACCTGGAGCGGCTCAATGGCCGCATCGGCATGGCCTCGGCCTCTGGACGCGACCTGCGCGCCCTGC ACGACTCCCTGCAGCGCATCCCCCCCCTGAGGGAGCTCATGGCAACCATGCAGACAGCACTGCTGTGCCAGCTGACCAAA GAGATCGACCCGCTGGAGGACATTCTAGACCTGGTGGGACGGGGCATCGTGGAGAATCCCCCCTTTTCCCTGCGCGAGGG GGGGATCATCGCCCCCGGCTACAACCCGGAGCTGGATGAACTGCGCAGCATCAGCCACGAGGGGAAGGGGTTCATCGCCC GGCTGGAGGCCCAGGAGCGGGCGCGCACCGGCATTTCCTCGCTGAAGATCCGCTTCAACAAGGTCTTCGGCTACTCCATC GAAATCACCAAGAGCAACCTGGCCAGCGTGCCGGCCGACTACATCCGTCGCCAGACCCTGGCCAATGCCGAGCGTTATAT CACGGAGGAATTGAAGAACTACGAGGAGAAGGTGCTGGGAGCCGAGGACCGCATCCATGAACTGGAGTACAGCCTGTTCC AGGAGATCCGCGAACGGGTGGCCGGCGAAGGGAGCCGCATCGCCTGCTCGGCCTCTGGCCTGGCCACCCTGGACGTGCTC ATATCCCTGGCCGGCGTGGCCGACGAGCGCGGCTACTGCAAGCCTTTAGTTGATGATTCCCAGGTGATCGACATTCATGA TGGCCGCCACCCGGTGATCGAGGCCATGAAGCTGGGGGAGCGCTTCGTCCCCAACGACACCCTGCTGGACGGAGGCGAGA GCCAGATTCTGATGATCACCGGCCCCAACATGGCCGGCAAGTCAACCTACATGCGCCAGGTGGCCCTGATCACCCTGATG GCCCAGGCCGGCAGCTTCGTTCCGGCGGCGTCGGCGCGCATCGGCATCGCCGACCGCATCTTCACCCGCGTGGGGGCCGG CGACAACCTGTCCCGGGGTCAGTCCACCTTCATGCTGGAGATGATGGAGGCGGCCGGCATCCTGCGCAATGCCACCCCCA AGAGCCTGATCGTCATGGACGAGATCGGCCGGGGCACCTCCACCTTCGACGGCGTCTCCATCGCCTGGGCCGTGGCCGAA TACATCCACGACACCCCCACCTGCCGCTCGCGGACCCTGTTCGCCACCCACTACCACGAACTGACCGAACTGGCGGCCAC CCGGGAGCGGATCAGGAACTTCACCGTGGCGGTCAGGGAGTGGAACGACCAGGTCATCTTCCTGCGCACCATCGTCCCCG GCGGCGCCTCCCACTCCTACGGCATCCAGGTGGCCCGTCTGGCCGGCATGCCGGCCGACGTCATCGAGCGCGCCAAAGAG ATCCTGCGCAACCTGGAGAACGGTGAATTTGAGGAGGGTGCGCCGCGCATCGCCAAAAGCCGAAGGCAACGCACCCCGGA CCCCTCGCCCCAGTTCTCCCTGTTCGAGAGCGACGAGGACCTGCTGCGCACGCGGCTGAAGAAGCTGAACATCGCCACCC TGACCCCGTTGGAGGCGCTCAACCTGCTGGACGAACTGAAGCGCATGGCCTGA Protein sequence : MADHTPMMRQYLEIKSGYPDAVLFFRMGDFYEMFLDDALLASRILDITLTSRNKGSGDEIPFCGVPYHSVTPYITKLIEN GHKVAICEQVEDPKQTKGIVRREVVRVITPGLLIETENLSPDDNNYLLALHQGAEEQWGVAWLDLSTGEFRVTELAGPGS ALAEAVCINPAEVLLADGVRLEEFPADLKEYLAQKIVSRAPAWVYERDYTSSLICDQFGAASPDVLGLEGLPSGLLAAGA ALYYLRENRKSAIPHIRDIRVYQRSEHLALDPATRRNLEITASMAEGKKSGSLLGCLDRTVTAMGARRLKQWLGYPLVGL EPIRSRLDAVEELLEGATTRDELAAQMKGIADLERLNGRIGMASASGRDLRALHDSLQRIPPLRELMATMQTALLCQLTK EIDPLEDILDLVGRGIVENPPFSLREGGIIAPGYNPELDELRSISHEGKGFIARLEAQERARTGISSLKIRFNKVFGYSI EITKSNLASVPADYIRRQTLANAERYITEELKNYEEKVLGAEDRIHELEYSLFQEIRERVAGEGSRIACSASGLATLDVL ISLAGVADERGYCKPLVDDSQVIDIHDGRHPVIEAMKLGERFVPNDTLLDGGESQILMITGPNMAGKSTYMRQVALITLM AQAGSFVPAASARIGIADRIFTRVGAGDNLSRGQSTFMLEMMEAAGILRNATPKSLIVMDEIGRGTSTFDGVSIAWAVAE YIHDTPTCRSRTLFATHYHELTELAATRERIRNFTVAVREWNDQVIFLRTIVPGGASHSYGIQVARLAGMPADVIERAKE ILRNLENGEFEEGAPRIAKSRRQRTPDPSPQFSLFESDEDLLRTRLKKLNIATLTPLEALNLLDELKRMA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| mutS | AAA80578.1 | DNA mismatch repair protein | Virulence | SPI-1 | Protein | 1e-131 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Ppro_1064 | YP_900747.1 | DNA mismatch repair protein MutS | VFG0562 | Protein | 8e-148 | 42 |
