Gene Information

Name : Ppro_1034 (Ppro_1034)
Accession : YP_900718.1
Strain : Pelobacter propionicus DSM 2379
Genome accession: NC_008609
Putative virulence/resistance : Unknown
Product : thiamine biosynthesis protein ThiC
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0422
EC number : -
Position : 1083519 - 1085297 bp
Length : 1779 bp
Strand : +
Note : required for the synthesis of the hydromethylpyrimidine moiety of thiamine

DNA sequence :
ATGAACGAGAACAGGAACTGCCCCAGGGGCACGAACAGCGCGGAGAGCGCGGTAACGGGGGAGTTTCCCCATTCCCGGAG
GGCCTATCTGACCGGTTCGCGGCCTGACCTGCGGGTGCCGATGAGGGAAATCCTCCTCACCGACTCTCCAGGGGGGGATG
GAGCGGCTAAGCCCGCTTCGATCCATGTCTACGACACAGCCGGCCCCTATGGCGATGCCACGCTTTGCTGCGATATCCGC
TCAGGCTTGGCCGGCCTGCGCGAGAACTGGATTGCCGAACGCTACGACACTGAAACGTATTCGGATCCGGCACTTCTGTC
GGAAAAGAGCAACTGTGCCGGCCGCGGGTCTGGCGCTGGCGCCTTTCCCGTCAGCCGCGCCCCCCGCCGCTCCCGCTCTG
GCGGCAACGTGACCCAGATGCACTATGCCCGCCAGGGCATTGTCACCCCCGAGATGGAGTTTGTCGCCATTCGGGAAAAC
CAGCGCCGGGAGGGAGCGGATACGCAACAGCAGACTCCTCATCCCGTTCGTGAGGGGGGCATGTCACGCCCCGCAGTAAT
CACCCCGGAATACGTCAGGTCCGAAGTTGCCCGCGGCAGGGCCATTATTCCGCTCAATATCAACCACCCGGAGGCTGAGC
CGATGATCATCGGCCGTAACTTCCTGGTTAAGGTCAACGCCAATATCGGCAATTCCGCCCTGGCCTCCTCTGTCATGGAC
GAGGTGGAAAAGATGATCTGGGCCATCCGCTGGGGTGCGGATACGGTGATGGACCTCTCCACCGGCGCCCACATCCACGA
GACGCGCGAGTGGATACTGCGCAACAGCCCGGTTCCCATTGGCACGGTGCCCATCTACCAGGCCCTGGAGAAGGTAGCCG
GCGTGGCCGAGGATCTCAGCTGGGACGTCTTCCGCGATACCCTGGTGGAGCAGGCGGAGCAGGGGGTGGACTACTTCACC
ATCCATGCCGGGGTGAGGCTGGAGCATCTGCCGCTGACCTCGCGACGCCTGACCGGCATCGTGTCCCGCGGCGGCTCGAT
CATGGCCAAATGGTGTCATGCCCACAGATGCGAAAGTTTCCTGTACACCCGCTTCGAGGAGATCTGCGAGATCATGAAGG
CCTACGACGTCAGCTTCTCCCTGGGGGATGGCATGCGTCCCGGCTCGCTGCACGATGCCAATGACGAGGCCCAGTTCGCC
GAACTGAAGACCCTGGGCGAGCTGACCCGGCTGGCCTGGAAGCATGACGTGCAGACCATGATAGAGGGGCCGGGGCATGT
GCCCCTGCACCTGATCAGGGAAAACATGGAGCTGCAGCTGGAGCAGTGCCACGAAGCGCCGTTCTATACCCTGGGGCCGC
TGGTCACCGATGTGGCGCCGGGATACGACCACATCACCTCGGCCATCGGCGGGGCCATGATCGGCTGGCTGGGCACCTCC
ATGCTCTGCTACGTCACCCGCAAGGAGCACCTGGGCCTGCCGGACAAAGATGATGTCAAGGAGGGGATTGTCACCTTCAA
GATCGCCGCCCATGCCGCCGACCTGGCAAAGGGGCATCCCGGCGCCCGACTGCGGGACGATGCCCTCTCCAAGGCGCGCT
TTGAATTCCGCTGGAAGGACCAGTTCAACCTGGCCCTCGACCCGGAAATGCCGCAACGCCTGCACGACCTGACCCTGCCC
GCCGAGGCTGACAAGGCATCCCATTTCTGCTCCATGTGCGGCCCGGATTTCTGCGCCATGAGAATCACGCGCAATATCCG
TGAACAGGCGGGAGCGTAA

Protein sequence :
MNENRNCPRGTNSAESAVTGEFPHSRRAYLTGSRPDLRVPMREILLTDSPGGDGAAKPASIHVYDTAGPYGDATLCCDIR
SGLAGLRENWIAERYDTETYSDPALLSEKSNCAGRGSGAGAFPVSRAPRRSRSGGNVTQMHYARQGIVTPEMEFVAIREN
QRREGADTQQQTPHPVREGGMSRPAVITPEYVRSEVARGRAIIPLNINHPEAEPMIIGRNFLVKVNANIGNSALASSVMD
EVEKMIWAIRWGADTVMDLSTGAHIHETREWILRNSPVPIGTVPIYQALEKVAGVAEDLSWDVFRDTLVEQAEQGVDYFT
IHAGVRLEHLPLTSRRLTGIVSRGGSIMAKWCHAHRCESFLYTRFEEICEIMKAYDVSFSLGDGMRPGSLHDANDEAQFA
ELKTLGELTRLAWKHDVQTMIEGPGHVPLHLIRENMELQLEQCHEAPFYTLGPLVTDVAPGYDHITSAIGGAMIGWLGTS
MLCYVTRKEHLGLPDKDDVKEGIVTFKIAAHAADLAKGHPGARLRDDALSKARFEFRWKDQFNLALDPEMPQRLHDLTLP
AEADKASHFCSMCGPDFCAMRITRNIREQAGA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00317 YP_008207782.1 Thiamine biosynthesis protein ThiC Not tested AbaR25 Protein 0.0 69
BJAB0868_00321 YP_008211647.1 Thiamine biosynthesis protein ThiC Not tested AbaR26 Protein 0.0 69
thiC YP_001598318.1 thiamine biosynthesis protein ThiC Not tested MDA Protein 0.0 65