Gene Information

Name : dnaB (FTN_0948)
Accession : YP_898590.1
Strain : Francisella novicida U112
Genome accession: NC_008601
Putative virulence/resistance : Unknown
Product : replicative DNA helicase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0305
EC number : -
Position : 1005508 - 1006905 bp
Length : 1398 bp
Strand : -
Note : -

DNA sequence :
TTGATGTCTATGGATTATCAGTTTAAAGCTGCTGAAACGACTTACTCTCTAGAAGCAGAAAAAGCTATCTTAGGGAATAT
ATTACTGTACAATCAAAATATTGAGTTAGTTGAAGATTTTCTTTTGATTGATGATTTTTTTGATAAAAGACATAAAACTA
TCTATAAACAGATTGTTACGCTTAACCAAGCAAACACTCCGTTTGATGTACTAATTTTAAGTGAATACCTTGCCACCGAG
GGACTTTTAGAACAAGCAGGTGGTGAGGCTTACATCATAGATTTAGCTGCTAATACACCTTCAATATCAAATATCAAGAC
GTACGCTAATATCGTAAAAGATAAGGCTAAGCTTAGAAGTTTACAAAATAGTGTAAATGATATCGTTCAGAAGATATATT
CAGCAGATTCAAAAAATCCTGATGAAGTTATTGATTACGCTGAGAGCAGAATACTTGATGTAGCTAAAGAGCGCGAAACA
CTTACCAAAGGTCCTGAATCGATAAGGTCTGTAATCCCAAAGCTTGTAGATAGAATGAGTGCTATAGTTGATTCTGGTAG
TGGTCTAACGGGGCTTTCAACAGGTTTTATAGATCTTGATAAAATGACATCAGGATTACAAAGAGCAAATATGGGTATCA
TAGCAGCTCGACCATCTATGGGTAAGACTGTTTTGGGTATCAACATCGCTCAAAATGTCGCAAAAATTGCTGATAAGCCA
GTATTAGTTTTTAGTCTAGAGATGCCGTCAGAAGATATTGTAACAAGGATGTTAGCTTCACAAGCGCGTGTAGAGATGAA
TTTACTTAAAGAATGTAATAGGTTAAATGATGCGCATTGGGTTAAAATCACTAGTGCTATGAAAACTTTAAGTGAAATGC
CACTATATATCGATGATACATCAAGTTTGACTCCAGCCGAGATGCGTTCAAGAGCGCGAAGATTATATAATGAGCATGGT
GGTTTAGCAATGATCTTGATAGATTACCTACAGCTTATGAAAATCCCAGGTTATGAGACTAACCGAACACTAGAGGTATC
AGAGATATCCCGTTCACTGAAGGCTTTAGCCAAAGAGTTGGATATACCAGTCATAGCACTATCGCAACTAAATAGAGCAG
TAGATGATCGTAAAGATAAACGACCAATGATGTCAGACTTAAGAGAATCAGGAGCGATTGAACAAGATGCTGACTTGATT
ATGTTTATTTATCGTGATGAAGTTTATAATAAAGATAAAGAAGATAATAAAAATCTAGGTGAAATAATAATAGGTAAGCA
GCGTAATGGTCCTATAGGAACTGTGCATGTGCGCTTTGATGGTCAGTTTGCTAGTTTTGCTAATTTAACTAATGAAAATG
ATCATATTTTACCTGGTGATATAGGTTATAACGAGTAA

Protein sequence :
MMSMDYQFKAAETTYSLEAEKAILGNILLYNQNIELVEDFLLIDDFFDKRHKTIYKQIVTLNQANTPFDVLILSEYLATE
GLLEQAGGEAYIIDLAANTPSISNIKTYANIVKDKAKLRSLQNSVNDIVQKIYSADSKNPDEVIDYAESRILDVAKERET
LTKGPESIRSVIPKLVDRMSAIVDSGSGLTGLSTGFIDLDKMTSGLQRANMGIIAARPSMGKTVLGINIAQNVAKIADKP
VLVFSLEMPSEDIVTRMLASQARVEMNLLKECNRLNDAHWVKITSAMKTLSEMPLYIDDTSSLTPAEMRSRARRLYNEHG
GLAMILIDYLQLMKIPGYETNRTLEVSEISRSLKALAKELDIPVIALSQLNRAVDDRKDKRPMMSDLRESGAIEQDADLI
MFIYRDEVYNKDKEDNKNLGEIIIGKQRNGPIGTVHVRFDGQFASFANLTNENDHILPGDIGYNE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
api2 CAF28476.1 putative DNA binding protein with DNA-dependent ATPase activity Not tested YAPI Protein 3e-77 44
dnaB2 YP_001402701.1 replicative DNA helicase Not tested YAPI Protein 1e-76 44
dnaB CAI36044.1 replicative DNA helicase DnaB Not tested PPHGI-1 Protein 8e-67 43
unnamed ABR13456.1 replicative DNA helicase Not tested PAGI-5 Protein 2e-76 43
dnaB1 YP_005176258.1 replicative DNA helicase Not tested ICEPmu1 Protein 2e-65 43
dnaB2 YP_001007676.1 putative DNA helicase Not tested YAPI Protein 2e-75 43
PMI2640 YP_002152342.1 DNA helicase Not tested Not named Protein 3e-78 42
STY4522 NP_458617.1 DNA helicase Not tested SPI-7 Protein 8e-72 42
t4227 NP_807829.1 DNA helicase Not tested SPI-7 Protein 8e-72 42