Gene Information

Name : FTN_0601 (FTN_0601)
Accession : YP_898250.1
Strain : Francisella novicida U112
Genome accession: NC_008601
Putative virulence/resistance : Unknown
Product : pyridoxal biosynthesis lyase PdxS
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0214
EC number : -
Position : 634045 - 634908 bp
Length : 864 bp
Strand : +
Note : with PdxT forms pyridoxal 5'-phosphate from glutamine, either ribose 5-phosphate or ribulose 5-phosphate, and either glyceraldehyde 3-phosphate or dihydroxyacetone phosphate

DNA sequence :
ATGTCAGATATTAACATAAAGATAGGTTTAGCAGAGATGTTAAAGGGTGGAGTTATCATGGATGTTGTCAACGCTGAACA
AGCAGAGATAGCTCAACAAGCTGGTGCAGTGGCTGTGATGGCTCTTGAGAGAGTCCCTGCTGATATTAGAAAAGATGGCG
GCATAGCTAGAATGTCTGATCCTAAACTTATCAAAGAGATAATGTCCGTAGTTTCAATACCTGTTATGGCAAAAGCTCGA
ATTGGTCATTTTGTCGAAGCACAAATCTTAGAGTCATTGGGTGTTGATTTTATTGATGAGAGTGAGGTTTTAACTCCAGC
TGATGAATTGAATCATATTGATAAAGATAGTTTTAAAGTGCCATTTGTGTGTGGTTGTACAAATCTTGGTGAGGCTTTGC
GAAGAATAGGTGAGGGTGCGGCATTGATTCGTACTAAAGGTGAAGCAGGTACAGGTAATATAGTCGAAGCCGTAAGACAG
CTAAGACAAGTTAACAAAGATATAAACTATATCAAAAATGCCGATAAGTCAGAGCTTATGGCTATAGCAAAAAATCTGCA
AGCACCTTATGATCTAGTCACGTATGTGCATAAAAATGGTAAATTACCAGTGCCAAATTTCTCAGCAGGTGGGGTGGCAA
CTCCAGCTGATGCAGCATTGATGATGCAGTTGGGAGCTGAATCAGTATTTGTTGGATCAGGAATATTTAAATCTGCAGAT
CCACTTAAGCGAGCTAGAGCAATAGTTAGTGCCGTTACATATTATAATGATGCTAAAATATTAGCTGAAGTTTCCGAAGA
TCTTGGTGAACCTATGACAGGTATTAATTGCGATTTTGAGAAATTTTCACAAAGAGGTTGGTAA

Protein sequence :
MSDINIKIGLAEMLKGGVIMDVVNAEQAEIAQQAGAVAVMALERVPADIRKDGGIARMSDPKLIKEIMSVVSIPVMAKAR
IGHFVEAQILESLGVDFIDESEVLTPADELNHIDKDSFKVPFVCGCTNLGEALRRIGEGAALIRTKGEAGTGNIVEAVRQ
LRQVNKDINYIKNADKSELMAIAKNLQAPYDLVTYVHKNGKLPVPNFSAGGVATPADAALMMQLGAESVFVGSGIFKSAD
PLKRARAIVSAVTYYNDAKILAEVSEDLGEPMTGINCDFEKFSQRGW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
DIP0227 NP_938620.1 pyridoxal biosynthesis lyase PdxS Not tested Not named Protein 3e-80 68
pdxS YP_005137204.1 pyridoxine biosynthesis protein Not tested Not named Protein 2e-80 68
pdxS YP_005141805.1 pyridoxine biosynthesis protein Not tested Not named Protein 5e-80 68