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Name : clpB (FTN_1743) Accession : YP_899349.1 Strain : Francisella novicida U112 Genome accession: NC_008601 Putative virulence/resistance : Virulence Product : chaperone clpB Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 1870244 - 1872823 bp Length : 2580 bp Strand : + Note : - DNA sequence : ATGAATATAAATAAATTTACAATAAAACTACAAGAAGCTCTAGCTGAGGCTCAATCTTATGCTTTTCAACAAAAAGCAAC TGAGTTTACATCAGCACATATACTAAAAGCTCTTTTGGAGCAAAATGATAGTGTTGCTATATCTATATTAAGCGTTTGTG GTGTTAATATACAAAACTTTATAAAAGCTGTAAATGATATGGTTGATAGTGTTGCGGTATTATCTGGAGAAGGTAATCCT CAAGTAACACCATCTAGAGATTTAATAGCTACATTACATAAAATGCAAGAGCTTGCTAATAAAAATGGTGATGAGTTTAT CTCGAGTGAGGTTTTCTTATTAGCCTCTTTAGAAGACAAAAGTTTAACTGGGCTGTATAACAAATTCGGTATTACAAAAG AAAAATTAACAAAAGCAGTCAATGATTATCGCGGAGGGGAGAAAGTGAGTAGTCAAAATCAAGAAGATATGAAAGGTGCA TTAGATAAATACACGGTAGATCTAACTGATCTAGCGAGAAAAGGAAAAATTGATCCAATAATCGGTAGAGATAGTGAGAT CCGTAGAACTATTCAAGTATTACAAAGAAGAACTAAGAACAACCCTGTGCTTATAGGTGAGCCTGGTGTTGGTAAAACTG CTATTGTCGAGGGCTTAGCTCAACGAATAGTTAATGATGAAGTACCAGAAGGTGTCAAAGGTAAAAAAGTACTATCATTA GATATGGGTGCACTGCTAGCTGGTGCTAAATTTAGAGGAGATTTTGAAGAGCGTCTAAAATCTGTATTAAAAGAATTATC AAAACAAGAAGGTAATGTAATTCTCTTTATAGATGAATTACATACTATGGTAGGTGCTGGTAAAGCAGAAGGATCTATGG ATGCTGGTAATATGCTTAAACCAGCTCTAGCTAGAGGTGAGCTAAAGTGTGTTGGTGCAACAACTTTAGATGAATATCGT GAGTATGTTGAGAAAGATCCAGCTCTAGAGAGAAGATTCCAAAAAGTGCTAGTTGATGAACCTACTGTAGAAGATACTAT CGCTATACTTAGAGGTCTAAAAGAAAGATATGAACTACATCATGGTGTAAATATCACAGATTCAGCTATTGTGAGTGCCG CTACATTATCACATAGATATATCACAGATAGACAGCTACCTGATAAAGCTATAGATCTAGTAGATGAAGCAGCAAGCCAA ATTCGTATGGAAATAGACTCTAAACCTGAAAAAATGGAAAGCTTATATCGTAGAATCATCCAGCTGAAAATGCAACGCGA ACAGCTAAAGAAAGAGAAAGATGATGCTACTAAAAAACGTTTAGAGATACTTGAGCAAGAAATAAAAGGGCTAGACTCAG AGTATAAAGGTCTAGAAGAGCTTTGGAAAGCTGAAAAGCTTAAGATGCAAGGTACAAGTAAACTAAAAGAAGAACTTGAG AAAGCTAAGTTTGAACTTGAAAAGTACCAAAGAGTGGGTGATTTGAGCAAAATGGCAGAATTACAATACGGTAAAATACC TGAGCTAGAAGCACAAATTAAACAAATAGAAGAAACTGAAGCAGAACCTTCTGAAAACAAATTAGTGAGAACATCTGTTA CAGAAAATGAGATTGCTGATGTAGTTTCAAAAGCTACTGGAATACCTGTATCTAAGATGATGGAAGGCGAAAAAGACAAG CTTCTAAATATGGAAAGTTTCTTACATAAAAGAGTAATTGGACAAGATCAAGCTATAAAAGCAGTATCAAATGCTGTAAG AAGATCTCGTTCTGGATTATCAGATCCAAATAGACCTATAGGTTCATTCATGTTCTTAGGTCCAACTGGTGTCGGTAAAA CTGAGCTTACAAAAGCTTTAGCAGAGTTTTTGTTTGATGATGAAGATGCCATGCTTAGAGTAGATATGTCTGAGTTTATG GAGAAACATTCTGTAGCTAGACTAATAGGCGCACCTCCGGGATACGTAGGTTATGAACAAGGCGGCTATCTAACTGAGCA TGTTAGAAGAAAACCTTATTCTGTAATCTTGCTAGACGAGGTTGAAAAAGCTCATGCTGATGTATTTAACATCTTACTAC AAGTGCTTGACGATGGTCGCTTAACAGATGGGCAAGGTAGAACAGTAGACTTTAAAAATACTGTAATAGTTATGACTTCT AACCTTGGTTCGCATAGAATCCAAGAAATGCAAGGTCAAGACTATGACACAGTCAAAGATGCTGTAATGGAAATGGTACT TAGCCACTTTAGACCTGAATTTGTAAATAGAGTTGATGATGCAATTGTCTTTGAACCTCTAAACAAAGAGATGATAACTG AAATAGCTAAAATACAAATCAAACGCTTAGAAAAACGTCTAGCAGATCTAAGTATAGGATTAGAAGTCACAACTGAAGCT ATGGATAAACTAGCTGATGCTGGCTTTGATCCTGTGTTTGGTGCTAGACCGCTTAAGCGCGCTATTCAAAACAACTTAGA AAACCCTCTGGCTCTAAAACTTCTAGATGGTGAGTTTAAAGCTGAAGATAAGATAGTTGTCGATATTGACGCTAATAACA ATATTACATTCTCTAAATAA Protein sequence : MNINKFTIKLQEALAEAQSYAFQQKATEFTSAHILKALLEQNDSVAISILSVCGVNIQNFIKAVNDMVDSVAVLSGEGNP QVTPSRDLIATLHKMQELANKNGDEFISSEVFLLASLEDKSLTGLYNKFGITKEKLTKAVNDYRGGEKVSSQNQEDMKGA LDKYTVDLTDLARKGKIDPIIGRDSEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIVNDEVPEGVKGKKVLSL DMGALLAGAKFRGDFEERLKSVLKELSKQEGNVILFIDELHTMVGAGKAEGSMDAGNMLKPALARGELKCVGATTLDEYR EYVEKDPALERRFQKVLVDEPTVEDTIAILRGLKERYELHHGVNITDSAIVSAATLSHRYITDRQLPDKAIDLVDEAASQ IRMEIDSKPEKMESLYRRIIQLKMQREQLKKEKDDATKKRLEILEQEIKGLDSEYKGLEELWKAEKLKMQGTSKLKEELE KAKFELEKYQRVGDLSKMAELQYGKIPELEAQIKQIEETEAEPSENKLVRTSVTENEIADVVSKATGIPVSKMMEGEKDK LLNMESFLHKRVIGQDQAIKAVSNAVRRSRSGLSDPNRPIGSFMFLGPTGVGKTELTKALAEFLFDDEDAMLRVDMSEFM EKHSVARLIGAPPGYVGYEQGGYLTEHVRRKPYSVILLDEVEKAHADVFNILLQVLDDGRLTDGQGRTVDFKNTVIVMTS NLGSHRIQEMQGQDYDTVKDAVMEMVLSHFRPEFVNRVDDAIVFEPLNKEMITEIAKIQIKRLEKRLADLSIGLEVTTEA MDKLADAGFDPVFGARPLKRAIQNNLENPLALKLLDGEFKAEDKIVVDIDANNNITFSK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 5e-107 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpB | YP_899349.1 | chaperone clpB | VFG2076 | Protein | 5e-117 | 41 |
