Name : lysU (FTN_0168) Accession : YP_897832.1 Strain : Francisella novicida U112 Genome accession: NC_008601 Putative virulence/resistance : Virulence Product : lysyl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG1190 EC number : - Position : 183091 - 184821 bp Length : 1731 bp Strand : + Note : - DNA sequence : TTGGGGCTACTAATTGCTAATGTGCAACAAATAATTACAGGGTTTAAAATGAGTAGTAAATTAAAAGATTTGATAAAAAT AACGATAAAAGAATATTTAGAAGCTAATGATATCACAGTTAAAGATGCTATTAGAGGCAAGATTAGAGAGCAGATTAGTG AGTTTTTAGGCGAGGTAAGCGATATAAATGAGCAGGTTAAAGAACAAATTTCAGCGCTTGTGAAAAAGCATGTAACAGAA TTACAAGAAAGCTCACAAATTGCTTTAAGAAAAGAAAAGCTAAAAACTTTAGCTCAGCAAAATAATGGCATAAGCCATCC AAATAGTTTCCGAAGAAATGCTGTTGCTATAGAGTTACACGATCGCTATGCTGATAAGACTAAGCAAGAATTAGAAGAGC TAGATAATAAACAACAATATAGTTTGACAGGTAGAGTAGTTCTACGCCGTGTCATGGGTAAAGCATCTTTTATAACACTA CAAGATTACACTGGTAGAATCCAAGTTTATCTAAAAAAGAGTGACTTGCCAGATGGGCAATATGAAACTTTTAAGAATCT CTGTGACTTGGGTGATATAGTTGGTATTACTGGTACTATGTTTAAGACAAATACTGGTGAACTTTCTGTTGAAGCAAATC ACTTTGAGATTTTGACAAAGGCAATTCGTCCTTTGCCTGATAAATTCCATGGTTTGGCAGATCAAGAAATGAGATATCGC CAAAGATATGTTGATTTAATAACAAATGAAAAAGCTCGTGAAGTTTTCAAGGTTCGCTCAAAAGTTGTGAGCTTTATCCG TAACTACTTTGATAGACTAGATTTTATGGAAGTAGAGACGCCGATGATGCATGTTTTGCAAGGTGGTGCTGCTGCTAAGC CATTTAAAACTCATCACAATGCTTTGGATATGCCTTTATATTTGCGTATCGCTCCAGAACTTTATCTAAAAAGACTAGTT GTTGGTGGTTTTGAGCGAGTTTATGAGATAAACCGTAATTTTAGAAACGAAGGTGTATCTTCACGCCATAATCCAGAATT TACAATGCTAGAGTTCTATATGGCGTATGCTGATTATAATGACCTTATGGATCTAACAGAAGATATGCTATCTAAACTTG TACAGGAAGTAATTGGTAGCGAGATACTTGAGTATGGTGAGTATAAAATCAACTTTGGTGGTAAGTACGAACGAATCTCA ATGGTTGACTCAATTGTTAAGTATAATGATGATATTACCAAAGAAGATTTAGTAACATTTGAATCTGCTAAAAAGATTGC TGAGAAACTAAAAATAAAAGTTGAAGCTTACCATGAACTTGGACATTTGATAAACGAAATATTTGAAGAAACTGTCGAAC ATCAGCTTATTCAACCGACATTTATTACAGATTATCCAGCTGTAGTTTCACCATTGGCGCGTAGACAAGACGGTAACCCT GAGTTTACCGATAGATTTGAGTTCTTTATTGGAGCACGTGAAGTTGCTAACGGCTTCTCTGAGCTAAATGATGCTGAAGA TCAAGCAGAGCGTTTCAGAAAACAGGTTGAAGCTGCGGCATCTGGAGATGATGAAGCTATGCCTTATGACAAAGACTATA TCCGCGCACTAGAGTATGGTATGCCTCCTACAGCAGGACAAGGAATCGGTATTGATAGACTGGTAATGTATCTAACAAAC TCTCAATCAATTAGAGATGTGATTCTATTTCCGCATATGAAGCCTGAGTAA Protein sequence : MGLLIANVQQIITGFKMSSKLKDLIKITIKEYLEANDITVKDAIRGKIREQISEFLGEVSDINEQVKEQISALVKKHVTE LQESSQIALRKEKLKTLAQQNNGISHPNSFRRNAVAIELHDRYADKTKQELEELDNKQQYSLTGRVVLRRVMGKASFITL QDYTGRIQVYLKKSDLPDGQYETFKNLCDLGDIVGITGTMFKTNTGELSVEANHFEILTKAIRPLPDKFHGLADQEMRYR QRYVDLITNEKAREVFKVRSKVVSFIRNYFDRLDFMEVETPMMHVLQGGAAAKPFKTHHNALDMPLYLRIAPELYLKRLV VGGFERVYEINRNFRNEGVSSRHNPEFTMLEFYMAYADYNDLMDLTEDMLSKLVQEVIGSEILEYGEYKINFGGKYERIS MVDSIVKYNDDITKEDLVTFESAKKIAEKLKIKVEAYHELGHLINEIFEETVEHQLIQPTFITDYPAVVSPLARRQDGNP EFTDRFEFFIGAREVANGFSELNDAEDQAERFRKQVEAAASGDDEAMPYDKDYIRALEYGMPPTAGQGIGIDRLVMYLTN SQSIRDVILFPHMKPE |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 2e-138 | 56 |
lysS | YP_005163386.1 | lysyl-tRNA synthetase | Not tested | Not named | Protein | 1e-85 | 42 |
Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
lysU | YP_897832.1 | lysyl-tRNA synthetase | VFG1668 | Protein | 1e-138 | 56 |