Gene Information

Name : hemC (FTN_0135)
Accession : YP_897800.1
Strain : Francisella novicida U112
Genome accession: NC_008601
Putative virulence/resistance : Unknown
Product : porphobilinogen deaminase
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0181
EC number : -
Position : 149241 - 150143 bp
Length : 903 bp
Strand : +
Note : transformation of porphobilinogen to hydroxymethylbilane in porphyrin biosynthesis

DNA sequence :
ATGAAACAAATAACTATAGCTAGTCGAGAAAGTAAACTAGCATTATGGCAGACAAATTTTGTCAAAAATCGTATCCAATC
AGAGCTAAATATTCCTTGTGAAATAAGTACTATGAAAACACAGGGAGATATTATTTTGGATCAACCACTAAACAAAATTG
GTGGTAAAGCACTATTTATGAAAGAGCTAGAAATAGCGATGCTTAATAACAAAGCTGATATTGCTGTACACTCTCTTAAA
GATGTTCCTTACCAATTACCGCAAGGTTTTTGTTTAGCAGGTTTTATGCCAAGAGAAGATCCTCGAGATGCTTTTGTATC
AAATAAATATAATTCTATTGATGATTTACCTAAAGGAGCTATTGTTGGAACATCTAGTCTACGGCGAAAAGCGCAGCTTT
TGCACTATAGAGATGATCTTGAGATTAGAGATTTAAGAGGCAATGTTCAAACTAGACTGTCTAAGCTTGATAATGGTGAT
TATGATGCGATTATTTTAGCTAGTGCTGGACTTATTCGCTTAGAGTTAGTTGAGAGAATAACTCAGTTTATCCCTGTAGA
AATATCTTTACCAGCGGTAGGTCAAGGTATAGTAGTTATAGAGGCATTAGAGAGAGATAATGACCTTTTAGAAAAAATAC
AAAAATTAAATTGTAGAGAAAGTTCTCGTGTAGCAACAGCTGAGAGAGCTTTTAATCAAGAATTAAAAGGTGGCTGTCAT
GTTGCAATAGGTGCTTATGCAGAATTAGATAATAATCAGATAACCTTGATGGCAATGGTTGCAAGTAGTGATGGTAAGAA
AATTCTCAAGCGAAAGATGATTGGGGATGATCCTACTAAACTTGGTAAATTGTTAGCTCAAGAGATGATAGCACTAGGTG
CATATAAAATATTGGAGAGTTAA

Protein sequence :
MKQITIASRESKLALWQTNFVKNRIQSELNIPCEISTMKTQGDIILDQPLNKIGGKALFMKELEIAMLNNKADIAVHSLK
DVPYQLPQGFCLAGFMPREDPRDAFVSNKYNSIDDLPKGAIVGTSSLRRKAQLLHYRDDLEIRDLRGNVQTRLSKLDNGD
YDAIILASAGLIRLELVERITQFIPVEISLPAVGQGIVVIEALERDNDLLEKIQKLNCRESSRVATAERAFNQELKGGCH
VAIGAYAELDNNQITLMAMVASSDGKKILKRKMIGDDPTKLGKLLAQEMIALGAYKILES

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00327 YP_008207792.1 Porphobilinogen deaminase Not tested AbaR25 Protein 1e-63 52
BJAB0868_00331 YP_008211657.1 Porphobilinogen deaminase Not tested AbaR26 Protein 1e-63 52