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Name : pdpB (FTN_1310) Accession : YP_898940.1 Strain : Francisella novicida U112 Genome accession: NC_008601 Putative virulence/resistance : Virulence Product : hypothetical protein Function : - COG functional category : S : Function unknown COG ID : COG3523 EC number : - Position : 1380761 - 1384042 bp Length : 3282 bp Strand : + Note : - DNA sequence : ATGAATTTTATTAAAAATCATCAAATATTAATAATTTCACTAACTATAGCAATAATTGTTTTATCAGTACTTGGTATTTT TATAATTAAAAAATGGCTTAAAACATCAAGAAATCCTAACAAAAAATCTGCCTCAAAGACCATAAAAAATGCAAAATCAT TGATCAAAAAGAATAAAGTAAAAAACAACTTAAGTGAATTGTATATTTTCTATGGGGACTATCTGGCAGCTAAAGATTAT ATAACAAAGATAAAGCCTCAAGCTCAAATCATTGATAATAATGAACTCCCTTTAATAGCTATTGATAAAAACAATACATC TCTCGTATTTGCAAATAATGAATTTTCGTACCTATATAAGTTAAAAAAGAAACTAAATCTACAATTTTATAAGCTTAACT TTTGCTTCGATATATCCGATGATTACTACCATGAAAATATCAAAATTAGTGAAATCTATAAAGAACTATTAAAATTAAGA TTAAAAAACTTCATAATATCTTTTTACACCTTATCTGAGCATACTAGAAGCTATAATAATGCAATTGATAAAAAATCAAT ATTTAAATTAACTTCTGATGCGGATACAAATCATAAAGCTGAAGAGGAAATATTATCAAAAATTCTTAGCTCTAAAGATG ATGTTAATAATAAATACAATAATGTTAGGATATTAAATCAAATAAGAAGGTTGCTAAAAAACATCTACCCTCAATTAAAA TCTATAAATAAAGAAATATTCTTTAATTTTGGGCTAAACATACCAGATAATATTATAGCAAAGAAAGATACAATATTTTT TAGCAGCTCTCCAAAAGGTATTATTATAAACTTAATATCTTTGTTATTTAGTTTTATATTTATCATTAATATTTTTCAAG AAATTAACATTAAAGAAAAACTCTCTATACAAGAGCTTAATCAACTACATGAAAGCGACTCTAATAAAATAATAAAAGAA GCTAGAAAAAAAATTGATGATGCTATACTTCTAGACATCCTATATCCAAAATCGATAAAATATCATTTCATATACGAACA ATATGCTGATACTCTCCTAAAGAATGTAATCCTACCAAAATATAATGATACATATGACTTATCAATGATTACATCATTTT TAATATTTTTTGAGTATTTGGATAACAAAATTACTAACCAACATACGAATAGAATACTTAAAATAATAAGCAGTATCACC AACCTATCTGAAAAGCAGCTAGATATCGTGATCAAGTATACGACCCCAAGTATAAGAACTGAAATGATTAAGTCAGCCAT CAACAGAGCAAATAAACTTTATACAAATCGTTTAATAGTTGTAGGTGAAGACTCCGAAAGTTACTTAAGTACTAAAGGAT TTAATGCTGAATACTTAGGGATTTCAAATACTAAAAGAGCGAAGGTCATAAATAATATTTATATACAATACCTATATAAA TGTGCTACAGATAATGCAATTTTAGATTTAAACGATAACTACATAATACCAACAGAAGTAAATAATATCTTCAAGATGTA TCAAGAGCAATTTGACACATCATCTAAAAAGCTATGTAATTCATCATATATTAACTCTATTACAAAGAGTGTTTCTTTGA TACTTAATCAAGAGGAAAATAAAAGAAAATTTAAAAGCTTCAGTGATATGCTAGACCATATCTATTATTTAGTAAAATCA TTAGAAAAAAATGCTAAAGATGTCGCAGATGATGGTAAAGAACAAACTAGCTCGATAACAGTATCGCTTATAAATTACGT TATAAATAGTGTTGTCAACCCTACTTATAATAAAAATGAGCTCCCACTAATAAGTCCAGTAAGTAAAAACCTATATATGG AGTTTGCTCCTAATTTCTATAGTAAAAGAATACTTATCTCCCCAATATACTCAAAAGAATATATTAAAGATAATATAGAT CCTATAAATAAAAAGTTTAATAGACTCGTCAATAATCTAAAGAATAACTTCAATATAGAACCCGACTTTATGATTGCTAT CTATAAAAGTTCTATAAACAACTACATTGAGAAATATATAGGATCCTATAATAAGATGATTGATAGCCTTAATAATGACT CTGAATTTAACAAAAATATATCTAACAAGGGTGCTCTTAAATTATATTTGCTAGCAATGTCATCAAAGGATTCTTCCTTT AATAGCCTAATAGAGTTTTATAGCACTAATACAGACCTAATAACTAATGAATCCGAAACCAATTCATCTAAAAAGATAAA TAAGCTTCAACATTTTTATGGAGAAATAACTAAATTAAACAAACAAAACAATACTAATGATCCAAATGATAAGTCATTGT GGGAGCCTATAGATAACTACTTTAAAGAAAACGATAAATATCTTGAGTCTAAGAGTTATGCCGACTATAAAAACATATTT AAACAGTTAAATAATCTAATAATAGAACAAGGCTATTCAAGTACATATAAAAATATCAAACAAGGATATGAACCACTACA AAAAGTTTACTCTGAACTTTCTAAGATAAATAATCATCAAGGTAATAATAACTTATATAAACTGCTGAAGAAACATCTAG ATATTGCCATTAATGCTATAAAAACTATCGCGATACAAGATGCTATAACTAAACTTAATAATACTGTCAATATTGAGTAC GAATATATAAATAATCAATTCCCTTTTAATAAGGATAGTAACTCGGCTGCAACAAATGAAGCTATAACCAAAGACTTTGA TAACAATGGTTATATATACTCTGGATTTATAGAGCAGCTATCTCCACTACTTTCTTATAATAAAACAGATGATAGATGGG AAAGTAAAGATTTTTCAAAACCTGAGGAAATAGACTATCTAAACAAATTCAATAAGGTATATCTTTTAAATAAGCTACTA TGGGATGATAAAAGAAATCCAAAAGCTATAAAATTTGATATAACTCCTATACCAAACAAAGATAATGATTATACATTTTT TAGCATAATCCTCGATAAGCAAAACTATGTAAACTCATTAAACATAAAATATTCAGATAGTATTGAAGTTTTGTACAACT GGAATTCACTTGAGTCAACAACTATTACCATAAAATTTGAGGATGGTAGTAATGAGCAAATAAGCTATCAAGGAAAATGG TCTATATTAAAAGCAATTAAAGACGCAAATTGTGATCAAAACAATATTTGTACCTGGGTAATCAAGCACAAAGGTAAAAC ATATCCTGTAAGCTTCAAAATAAAATCAAAATTCTTACAAGTATTAGGATGGCAAAAACAAGGAGAAGTTAATGTACAAT AA Protein sequence : MNFIKNHQILIISLTIAIIVLSVLGIFIIKKWLKTSRNPNKKSASKTIKNAKSLIKKNKVKNNLSELYIFYGDYLAAKDY ITKIKPQAQIIDNNELPLIAIDKNNTSLVFANNEFSYLYKLKKKLNLQFYKLNFCFDISDDYYHENIKISEIYKELLKLR LKNFIISFYTLSEHTRSYNNAIDKKSIFKLTSDADTNHKAEEEILSKILSSKDDVNNKYNNVRILNQIRRLLKNIYPQLK SINKEIFFNFGLNIPDNIIAKKDTIFFSSSPKGIIINLISLLFSFIFIINIFQEINIKEKLSIQELNQLHESDSNKIIKE ARKKIDDAILLDILYPKSIKYHFIYEQYADTLLKNVILPKYNDTYDLSMITSFLIFFEYLDNKITNQHTNRILKIISSIT NLSEKQLDIVIKYTTPSIRTEMIKSAINRANKLYTNRLIVVGEDSESYLSTKGFNAEYLGISNTKRAKVINNIYIQYLYK CATDNAILDLNDNYIIPTEVNNIFKMYQEQFDTSSKKLCNSSYINSITKSVSLILNQEENKRKFKSFSDMLDHIYYLVKS LEKNAKDVADDGKEQTSSITVSLINYVINSVVNPTYNKNELPLISPVSKNLYMEFAPNFYSKRILISPIYSKEYIKDNID PINKKFNRLVNNLKNNFNIEPDFMIAIYKSSINNYIEKYIGSYNKMIDSLNNDSEFNKNISNKGALKLYLLAMSSKDSSF NSLIEFYSTNTDLITNESETNSSKKINKLQHFYGEITKLNKQNNTNDPNDKSLWEPIDNYFKENDKYLESKSYADYKNIF KQLNNLIIEQGYSSTYKNIKQGYEPLQKVYSELSKINNHQGNNNLYKLLKKHLDIAINAIKTIAIQDAITKLNNTVNIEY EYINNQFPFNKDSNSAATNEAITKDFDNNGYIYSGFIEQLSPLLSYNKTDDRWESKDFSKPEEIDYLNKFNKVYLLNKLL WDDKRNPKAIKFDITPIPNKDNDYTFFSIILDKQNYVNSLNIKYSDSIEVLYNWNSLESTTITIKFEDGSNEQISYQGKW SILKAIKDANCDQNNICTWVIKHKGKTYPVSFKIKSKFLQVLGWQKQGEVNVQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| pdpB | AAP58967.1 | PdpB | Not tested | FPI | Protein | 0.0 | 100 |
| pdpB1 | YP_001891764.1 | hypothetical protein | Not tested | FPI | Protein | 0.0 | 98 |
| pdpB2 | YP_001892259.1 | hypothetical protein | Not tested | FPI | Protein | 0.0 | 98 |
| pdpB1 | YP_170297.1 | hypothetical protein | Not tested | FPI | Protein | 0.0 | 98 |
| pdpB2 | YP_170605.1 | hypothetical protein | Not tested | FPI | Protein | 0.0 | 98 |
| pdpB1 | YP_001121176.1 | pathogenicity deteminant protein pdpB1 | Virulence | FPI | Protein | 0.0 | 98 |
| pdpB2 | YP_001121579.1 | pathogenicity determinant protein pdpB2 | Virulence | FPI | Protein | 0.0 | 98 |
