|
Name : hslU (FTN_0996) Accession : YP_898638.1 Strain : Francisella novicida U112 Genome accession: NC_008601 Putative virulence/resistance : Unknown Product : ATP-dependent protease ATP-binding subunit HslU Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG1220 EC number : - Position : 1053996 - 1055363 bp Length : 1368 bp Strand : + Note : heat shock protein involved in degradation of misfolded proteins DNA sequence : ATGACACAAATAATGACTCCAAAAACAATCGTACATGAATTAGAAAGACATATAATTGGTCAAAATGATGCTAAAAAAGC AGTTGCTATTGCTTTGCGTAATAGATGGCGCAGAATGCAACTTGACAATGAAATGCGTCAAGAAGTAACTCCTAAGAACA TTCTTATGATTGGTCCAACAGGTGTGGGTAAAACAGAAATTGCGCGTAGATTAGCAAAATTAGCAGATGCTCCATTTATC AAAGTAGAAGCAACTAAATTTACAGAAGTTGGTTATGTAGGCAAGGATGTTGAATCTATTATCCGTGATTTAGTTGAAAC AGCTGTCAAAATGAAGCGTGAGGAAGCTAAAGAAAAAGTCACAGAAAAGGCTGCTAGATTAGCCGAAGATAGAATTTTAG ATGTGCTAATCCCACCTGCAAGAACTTCAGAATCAAAGGTTGGTTTTGCAAATGAACCTGCAGAAGATGCTGCTAGTAAA AAGGAAAAAGAAAATAAAACTCGTGAAATATTTAGAAAGAAAATCCAAAAGGGCGAACTTGATGATAAAGAAATCGAGAT TGAAGTAGCTGTGGCTCCAAAAACTATAGGCGTAATGGGTCCTCCAGGAATGGAAGATATGACAAGTCAGTTGCAAGACC TTTTCTCTAGCTTAAGCACTGATAAGAAAAAAAACAAAAAAATGCGTATTAAAGATGCGATCAAGTTAGCCCAAGATGAA GAAGCTGCAAAACTAGTTAATGAAGAAGACATAAAGGCTCGTGCTCTAGAAGCTGTTGAGCAAAATGGTATCGTATTCTT AGATGAGATTGATAAAGTATGTAGAAAATCAAGCAACTCAGGGGCTGATGTGTCACGCGAAGGTGTACAACGTGATTTAT TACCATTAGTCGAAGGTTCTACAGTATCCACAAAGTATGGCATGATCAAAACTGATCATATACTATTTATTGCATCCGGT GCATTTCATGTTGCTAAACCTTCTGACCTTATACCAGAGCTACAAGGTAGATTACCAATTAGGGTTGAGCTGAAATCTCT AGAAATAGAAGATTTTGTAAGAATTTTAAGAGAACCTGACTGCTCTATTCTTAAGCAGTATATTGCTTTGATGAAAACTG AAGGTGTTGATTTAAGCTTTGAAGAAGATGCAATTAGAAAAATTGCTGAAATTGCCTATAAAGTCAATGAAGAAGTTGAA AATATCGGTGCTAGAAGACTTCATACTGTTATGGAAAGACTTCTTGAGGAAATCTCTTTCGATGCTCCAGAACTAGTAGA GAAAAATATCAACATAACTACAGACTATGTTAATGAAAAACTAGGAAACCTAGTTAAGAATAAAGATCTAAGTCAATATA TTCTATAA Protein sequence : MTQIMTPKTIVHELERHIIGQNDAKKAVAIALRNRWRRMQLDNEMRQEVTPKNILMIGPTGVGKTEIARRLAKLADAPFI KVEATKFTEVGYVGKDVESIIRDLVETAVKMKREEAKEKVTEKAARLAEDRILDVLIPPARTSESKVGFANEPAEDAASK KEKENKTREIFRKKIQKGELDDKEIEIEVAVAPKTIGVMGPPGMEDMTSQLQDLFSSLSTDKKKNKKMRIKDAIKLAQDE EAAKLVNEEDIKARALEAVEQNGIVFLDEIDKVCRKSSNSGADVSREGVQRDLLPLVEGSTVSTKYGMIKTDHILFIASG AFHVAKPSDLIPELQGRLPIRVELKSLEIEDFVRILREPDCSILKQYIALMKTEGVDLSFEEDAIRKIAEIAYKVNEEVE NIGARRLHTVMERLLEEISFDAPELVEKNINITTDYVNEKLGNLVKNKDLSQYIL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hslU | YP_003728753.1 | heat shock protein HslU | Not tested | cag PAI | Protein | 4e-91 | 48 |
