Gene Information

Name : hslU (CFF8240_1002)
Accession : YP_892168.1
Strain : Campylobacter fetus 82-40
Genome accession: NC_008599
Putative virulence/resistance : Unknown
Product : ATP-dependent protease ATP-binding subunit HslU
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG1220
EC number : -
Position : 1007049 - 1008371 bp
Length : 1323 bp
Strand : +
Note : heat shock protein involved in degradation of misfolded proteins

DNA sequence :
ATGAATCTTACACCAAAAGAGATCGTAAAATTTTTAGATGATTATGTTATAGGACAAGATGACGCAAAAAGAGTTATCGC
AGTAGCTCTTAGAAACCGTTATAGAAGAATGAAACTTGATAAAAGTATTCAAGAAGATATTATACCAAAGAATATCTTGA
TGATAGGCTCTACGGGAGTCGGTAAAACCGAGATCGCAAGGCGGCTCTCAAAGATGTTTGGTTTGCCATTTATCAAAGTA
GAAGCTAGCAAATATACCGAAGTTGGCTTTGTGGGTAGAGATGTTGAATCTATGGTGCGAGATTTGGCTATGGCTAGTTT
AAATTTAGTAAAAAAAGAGCAACGCGAAAAAAATTCAGATAGAATAAACGAGTATATAGAAAAAAAGATACTTGAAAAAC
TTCTTCCTCCTCTTCCAAAAGGTGCTAGTGAGGATAAATTAAGAGATTACGAATCTAGCTATTTGCGTATGAAAGACAAA
CTCCAAAAAGGCGAACTAGATCATTTAAATATCGAATTAGACATAGACCAATCTACTTTTGAAGCCGGTGGAAATTTGCC
TCCAGATATGGCTGCTATGCAAGAAAGTTTTATCAAAGTCATAGGTATAGCAAATAAAAAAGTGAAAAAAGAATTTAAAG
TAAAAGATGCTAGAGAAGCTCTAAAAAATGAAGCTAGCGAAAAAATTTTAGACATGGAAAGTATAAAAACAGAAGCTTTA
AAAAGAGCCGAGAATGAAGGTATTATATTTATAGACGAGATAGATAAAGTAGCAGTTTCTAGCGGAAACTCAGGACGTCA
AGATCCCAGCAAAGAAGGTGTTCAAAGAGATCTTTTACCTATAGTGGAAGGTTCGAACGTAAGTACTAAATTTGGAAATT
TGAAAACAGATCACATCTTATTTATAGCTGCAGGAGCATTTCATATAAGTAAACCAAGCGATCTTATACCAGAACTTCAA
GGAAGATTTCCACTACGTGTAAATTTAGATAGCTTAGACGAAAAAGCACTTTATGAAATACTAACAAAACCTAAAAACTC
ACTTCTATCTCAGTACAAAGCGCTCTTAGGAGTTGAAGGAGTAGAACTCGAGTTTAGCGATGAAAGCATAAAAGAGATAG
CAAAGGTTACTCAAAATACAAATCAAAAAGTAGAAGATATAGGAGCCAGAAGACTTCATACGGTCATTGAAAAGGTTCTT
GAAGATATAAGTTTTGATGCAGATAGCTATAAAAATGAAAAAGTAACTATCACAAAAGAGTTAGTAGACAAAAAGCTTGG
CGATATCTGTCAAAATGAAGATCTTGCGAAATATATACTATGA

Protein sequence :
MNLTPKEIVKFLDDYVIGQDDAKRVIAVALRNRYRRMKLDKSIQEDIIPKNILMIGSTGVGKTEIARRLSKMFGLPFIKV
EASKYTEVGFVGRDVESMVRDLAMASLNLVKKEQREKNSDRINEYIEKKILEKLLPPLPKGASEDKLRDYESSYLRMKDK
LQKGELDHLNIELDIDQSTFEAGGNLPPDMAAMQESFIKVIGIANKKVKKEFKVKDAREALKNEASEKILDMESIKTEAL
KRAENEGIIFIDEIDKVAVSSGNSGRQDPSKEGVQRDLLPIVEGSNVSTKFGNLKTDHILFIAAGAFHISKPSDLIPELQ
GRFPLRVNLDSLDEKALYEILTKPKNSLLSQYKALLGVEGVELEFSDESIKEIAKVTQNTNQKVEDIGARRLHTVIEKVL
EDISFDADSYKNEKVTITKELVDKKLGDICQNEDLAKYIL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hslU YP_003728753.1 heat shock protein HslU Not tested cag PAI Protein 2e-130 64