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Name : CFF8240_0988 (CFF8240_0988) Accession : YP_892156.1 Strain : Campylobacter fetus 82-40 Genome accession: NC_008599 Putative virulence/resistance : Unknown Product : type I restriction-modification system subunit S Function : - COG functional category : V : Defense mechanisms COG ID : COG0732 EC number : 3.1.21.3 Position : 992013 - 993218 bp Length : 1206 bp Strand : - Note : identified by match to protein family HMM PF01420 DNA sequence : ATGAGCAATAGCTACAAACAAACAGCCGTGGGACGCATCCCGAAAGAGTGGGAAGTTGTTAGGTTGGGAGATGTTTTTCA GCGAGTTACTAGAAAAAATACCGTCAATAGCGATAATGTTCTTACAATATCGGCTCAAAACGGTCTGATAAAACAAGAAA ATTTTTTTACAAAAAGTGTTGCAAGTAAAGATTTGAGTAATTATATCTTGTTAGAAAAAGGAGAATTTGCCTATAATAAA AGCTACTCTAGCGGATATCCAATGGGGGCAACGAAGCGTTTAAACTTCTATAATTATGGCGTGTTATCAAATTTATACAT ATATTTTAAAATCAAAAATGGAAATAGCGATTTTTACGAGCAGTATTTTGAAGCCGGACTCTTAAACAAAGAAATACATC AAATTGCACAAGAAGGAGCTAGAAATCACGGATTATTAAATATATCTGTTGTTGATTTTTTTAATATTTTAATAGTGCTT CCACCACTAAAAGAGCAAGAAAAAATAGCGGAAATTCTATCTACTTGCGATAAAGTTATATCAAATTTAGATGAATTAAT AAAGGCTAAAACAAATCTTAAAACAGCCCTAATGCAAAATCTACTCTCCGCTAAAATCCGCTTCAAAGAATTCACCGACC CTTGGCAAGAAAAATTTGGGGATAAACTTTTTAAAACTATAACTGAAATAAATCAAAACTACGATTTGCCTATTCTAGCA ATTTCGCAAGAATTTGGTGCAATACCAAGAAATTTAATTGATTACAAAGTTATTGTTTCTTATAAAAGTATTTCAAATTA TAAAGTTGTTAGAAAAGGAAATTTTATTATAAGCCTTAGGTCTTTTCAAGGCGGAATAGAATATTCTAAATATGATGGAA TTTGCAGTCCAGCTTATATTATTTTAAAGCCAATCCAACAAATTTTCGATAATTTTTTTAAATACTATTTCAAAAGTCAC GATTATATTCAAAAACTAAATTCAAAACTTGAAGGCATAAGAGACGGTAAAATGGTAAGTTTTAAACAATTTTCTGAAAT TAAAATCCCATTACCAAATTTAGCCGAGCAACAAAAAATCGCAGAAGTGTTATCGGCGTGTGATGATGAGATAAATTTAC TCAAAGATAAGTTATCGAATTTAAAGCTCCAAAAGCAGGGCTTAATGCAAAATCTACTAACAGGAAAGGTCAGGGTAAGG GTATGA Protein sequence : MSNSYKQTAVGRIPKEWEVVRLGDVFQRVTRKNTVNSDNVLTISAQNGLIKQENFFTKSVASKDLSNYILLEKGEFAYNK SYSSGYPMGATKRLNFYNYGVLSNLYIYFKIKNGNSDFYEQYFEAGLLNKEIHQIAQEGARNHGLLNISVVDFFNILIVL PPLKEQEKIAEILSTCDKVISNLDELIKAKTNLKTALMQNLLSAKIRFKEFTDPWQEKFGDKLFKTITEINQNYDLPILA ISQEFGAIPRNLIDYKVIVSYKSISNYKVVRKGNFIISLRSFQGGIEYSKYDGICSPAYIILKPIQQIFDNFFKYYFKSH DYIQKLNSKLEGIRDGKMVSFKQFSEIKIPLPNLAEQQKIAEVLSACDDEINLLKDKLSNLKLQKQGLMQNLLTGKVRVR V |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SACOL0477 | YP_185367.1 | type I restriction-modification system S subunit | Not tested | vSa¥á | Protein | 3e-55 | 43 |
| hsdS | NP_370956.1 | restriction modification system specificity subunit | Not tested | vSa¥á | Protein | 3e-55 | 43 |
| hsdS | NP_373643.1 | restriction modification system specificity subunit | Not tested | vSa¥á | Protein | 3e-55 | 43 |
| hsdS | YP_001331433.1 | type I restriction modification system, site specificity determination subunit | Not tested | vSa¥á | Protein | 3e-55 | 43 |
| SAUSA300_0406 | YP_493120.1 | putative restriction/modification system specificity protein | Not tested | vSa¥á | Protein | 3e-55 | 43 |
