Gene Information

Name : CFF8240_0723 (CFF8240_0723)
Accession : YP_891898.1
Strain : Campylobacter fetus 82-40
Genome accession: NC_008599
Putative virulence/resistance : Virulence
Product : protein AfeB
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1121
EC number : -
Position : 729698 - 730540 bp
Length : 843 bp
Strand : +
Note : identified by match to protein family HMM PF00005

DNA sequence : 
ATGAAAAAAATTAGCTTAGATGTTTCAAATTTGAATGTCAGATATGCTGATGTAGTGGCTTTAGAAGATATAAACTTTAG
TTTAGAAGGTGGAAACATATGCGCTCTTATCGGTACAAACGGAAGCGGTAAATCAACTCTTTTTAAGTCTATAATGGGAG
TAATAAAGCCAAAAGGCTCAGTTATAAAAATATGCGGTTTAAGTCTTAATGATGCGATAAAAAATAGTCTCATAACATAC
GTTCCTCAAAATGAAGAGATAGACTTTGACTTTCCTATAAGCGTATGGGAGCTTGTAATGATGGGCAGATATGCTCATAT
GGGATTTTTTAAAAATCCAAAACAGAGTGATAAAATAGCAGTAGAAGATGCTTTAAAAAAAGTAGATATGTATGAGTTTA
AAGATCGTCAAATTTCTAAATTAAGCGGTGGTCAAAAAAAGCGTATATTTATAGCAAGATCTTTGGCCAGCGATGCTAAA
ATCATACTTTTAGACGAACCTTTTAATGGAGTTGATGCAAAAACCGAGAGTATGATACTAGATCTTCTTATAAAACTTCG
TTCAAGTGGAAATCTTATTCTTATATCTACTCATAATCTTGGAATGGCTGCTCAGTATTGCAATAGAGCGATACTTCTTA
AACATAAGATCTTGGCTTACGGATTTACGAACGATGTTTTAACTCCTGAAAATCTCAGTCAGGTTTTTGGCGGAAGTTTA
AGACATTTTAAGATAGAAGTCGACGATATGAGTTGTAATATAGCGCTTATAAGCGACGATGAAAAACCGCTTATAGTGGT
AGATGAAAAGGTGCAAGATGGAATGGTTAATAGAGCCTTTTAA

Protein sequence : 
MKKISLDVSNLNVRYADVVALEDINFSLEGGNICALIGTNGSGKSTLFKSIMGVIKPKGSVIKICGLSLNDAIKNSLITY
VPQNEEIDFDFPISVWELVMMGRYAHMGFFKNPKQSDKIAVEDALKKVDMYEFKDRQISKLSGGQKKRIFIARSLASDAK
IILLDEPFNGVDAKTESMILDLLIKLRSSGNLILISTHNLGMAAQYCNRAILLKHKILAYGFTNDVLTPENLSQVFGGSL
RHFKIEVDDMSCNIALISDDEKPLIVVDEKVQDGMVNRAF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitB NP_461783.1 ATP-binding protein Virulence SPI-1 Protein 3e-59 48
sitB AAD41066.1 SitB Virulence centisome 63 pathogenicity island Protein 2e-59 48
sitB NP_457256.1 Iron transport protein, ATP-binding component Virulence SPI-1 Protein 2e-58 47
sitB NP_806465.1 iron ABC transporter ATP-binding protein Virulence SPI-1 Protein 2e-58 47
sitB YP_217782.1 iron transporter: fur regulated Virulence SPI-1 Protein 7e-59 47

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CFF8240_0723 YP_891898.1 protein AfeB BAC0350 Protein 1e-59 48
CFF8240_0723 YP_891898.1 protein AfeB BAC0440 Protein 8e-62 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CFF8240_0723 YP_891898.1 protein AfeB VFG0526 Protein 1e-59 48