Gene Information

Name : CFF8240_0722 (CFF8240_0722)
Accession : YP_891897.1
Strain : Campylobacter fetus 82-40
Genome accession: NC_008599
Putative virulence/resistance : Virulence
Product : protein AfeA
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0803
EC number : -
Position : 728839 - 729711 bp
Length : 873 bp
Strand : +
Note : identified by match to protein family HMM PF01297

DNA sequence : 
ATGAAAAAAATATCTATTTTTATATTTGTAATAGCAATGATTGGTTCTTTAAATGCACAAAAGCTTGAGGTTTTAACTAG
TTTTACGATACTAGCAGATATCGCAAAAAATGTTGCAAAAGATAGTGCTAATGTAAATAGTTTGACAAAAATGGGCACAG
AGATACATGGATATGAAGCAACTCCAAAAGATATTTTAAAAGCTAAAAAAGCTGATATCATTCTTTATAATGGTTTAAAT
TTAGAGCTTTGGATGGATAAGTTTTTGAGCAATGCAAAAAAACCTAGTTATAATCTAAGTGATGGTGTCACTCCTATTTT
TATAAGCGATGGAGGATACAAAGGCAAACCAAACCCTCATGCGTGGATGAGTATCAAAAATGTTCAAATTTACATTAAAA
ATATCGTAGAAATTTTTAGTAGGCATGATCCAAAAAATGCTGATATCTATGCTAAAAACGCAGATGAGTATATAAAAATT
TTAAATGATTTAGACTCTAAATTTAAAGCCGAGTTTGCCAAAGTTCCGCTTGAACAAAGATATCTTATAACAAGTGAAGG
CGCTTTTAGTTATTTAACTAAGGAGTATGATCTAAAAGAACTTTATATATGGAGTGTAAATAGCGATGAGCAAGGCACTA
CTAAACAGATAAAAAACTTAGTTGATAAGATAAAAAATTCTGAAGCGAAGGTGATTTTTAGTGAGAGCACTATTAGTCCA
AAACCTGCTATGACTATAGCAAACGAGAGTGGAATTAGATACGGCGGAGTGCTTTATGTAGATAGTCTAAGTAAAGAAAT
TCCTACTTATGTAGATCTTATGAAAACTACGGTTTCGACTATTATAAACGGATTAAATAATGAAAAAAATTAG

Protein sequence : 
MKKISIFIFVIAMIGSLNAQKLEVLTSFTILADIAKNVAKDSANVNSLTKMGTEIHGYEATPKDILKAKKADIILYNGLN
LELWMDKFLSNAKKPSYNLSDGVTPIFISDGGYKGKPNPHAWMSIKNVQIYIKNIVEIFSRHDPKNADIYAKNADEYIKI
LNDLDSKFKAEFAKVPLEQRYLITSEGAFSYLTKEYDLKELYIWSVNSDEQGTTKQIKNLVDKIKNSEAKVIFSESTISP
KPAMTIANESGIRYGGVLYVDSLSKEIPTYVDLMKTTVSTIINGLNNEKN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitA YP_217781.1 iron transporter: fur regulated Virulence SPI-1 Protein 4e-62 49
sitA NP_457255.1 Iron transport protein, periplasmic-binding protein Virulence SPI-1 Protein 2e-62 49
sitA NP_806464.1 iron transporter periplasmic-binding protein Virulence SPI-1 Protein 2e-62 49
sitA NP_461782.1 periplasmic binding protein Virulence SPI-1 Protein 2e-62 49
sitA AAD41065.1 SitA Virulence centisome 63 pathogenicity island Protein 1e-62 49

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CFF8240_0722 YP_891897.1 protein AfeA BAC0349 Protein 8e-63 49
CFF8240_0722 YP_891897.1 protein AfeA BAC0439 Protein 1e-60 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CFF8240_0722 YP_891897.1 protein AfeA VFG0525 Protein 7e-63 49