|
Name : amt (CFF8240_0549) Accession : YP_891739.1 Strain : Campylobacter fetus 82-40 Genome accession: NC_008599 Putative virulence/resistance : Unknown Product : ammonium transporter Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG0004 EC number : - Position : 555682 - 556965 bp Length : 1284 bp Strand : - Note : identified by match to protein family HMM PF00909; match to protein family HMM TIGR00836 DNA sequence : ATGAAAAACTACTTATTTTTAATATCATTTACAGCTCCGCTTTTTAGTAGCGATTGGGTAGTTTCGTTTGATAAAATAGA TAGCGGAAATACCGCGTGGCTACTTATAAGCACGTCTTTGGTACTTTTTATGACAATACCTGGTATAGCACTCTTTTACG CGGGTATGGTAAGAAAGAAAAATATACTAGCAACAATGATGCAAAGCTTCACGACAGTAGCGATGGTAAGCGTACTTTGG ATGATTATAGGTTATTCTATAGCATTTACGAATGGAAATCCTTTTATAGGAGGATTTGACCGTTTATTTTTAAATGGAGT AAGTGTAGTCTCAAGCGAGCAAACTCTCACAGTTCATCCAAACGCCAGTAGCATTCCAGAGTCTGTTTTTATCGTATTTC AAATGACTTTTGCTATTATATCTTGTGCTATAATTACGGGATCTTTCGCAGAGAGAGTTAAATTTAGCTCTCTTATGATA TTTATAGCTATTTGGGTTTTAGTTGTTTATGCACCGACAGCTCACTGGGTGTGGGAAAGCAACGGTTGGCTTGCACATCA CGGCGTACTGGACTATGCAGGAGGAACCGTTGTACATATAAATGCAGGGGTCGCAGGACTTGTCGGAGCTATTATATTAA AACCGCGCCTTGGATATAAAAAAGAAGTTATGCCTCCGCATAATCTAGTTTTAACGCTGATTGGCGTCGCGATGCTTTGG TTTGGCTGGTTTGGATTTAACGCAGGAAGCGCTCTAGCAGCAGACGCAAGAGCCGCAATGGCGATGCTTGTAACTCAAGT TGCAACCGCAATCGGAGCGATAACTTGGCTATTTTTTGAAATGATTCATAAAAATAAACCCTCAGCTCTTGGATTTGCTA GCGGAGCCGTGTGCGGACTAGTTGGCATAACTCCTGCAGCAGGATACGTAAATGCAAGCGGCGCTTTGGCTATAGGTATT ATATCTTCGGGGGTTTGCTATTACGTCATAACGGTAATAAAAAGAAAATTTAACTATGATGATAGCTTAGATGCTTTTGG TATACACGGTATTGGAGGAATCATAGGAGCGATTTTAACTGCGGTATTTTGCGATGAAAGCATAAGCGCAGCTACGTCTA GTATAAAAATTCAAATAATAGGAGTAGCGATAACGGTAGTTTATAGTGGTATAGCGAGCTATATAATATTAAAAATTATA GACAAAACAATCGGCTTAAGAGTATCAAAAGATGAAGAAAGAGAGGGACTTGATATAGCAAGTCACGGTGAGAGACTCGG GTAA Protein sequence : MKNYLFLISFTAPLFSSDWVVSFDKIDSGNTAWLLISTSLVLFMTIPGIALFYAGMVRKKNILATMMQSFTTVAMVSVLW MIIGYSIAFTNGNPFIGGFDRLFLNGVSVVSSEQTLTVHPNASSIPESVFIVFQMTFAIISCAIITGSFAERVKFSSLMI FIAIWVLVVYAPTAHWVWESNGWLAHHGVLDYAGGTVVHINAGVAGLVGAIILKPRLGYKKEVMPPHNLVLTLIGVAMLW FGWFGFNAGSALAADARAAMAMLVTQVATAIGAITWLFFEMIHKNKPSALGFASGAVCGLVGITPAAGYVNASGALAIGI ISSGVCYYVITVIKRKFNYDDSLDAFGIHGIGGIIGAILTAVFCDESISAATSSIKIQIIGVAITVVYSGIASYIILKII DKTIGLRVSKDEEREGLDIASHGERLG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00287 | YP_008207752.1 | Ammonia permease | Not tested | AbaR25 | Protein | 4e-97 | 58 |
| BJAB0868_00291 | YP_008211617.1 | Ammonia permease | Not tested | AbaR26 | Protein | 4e-97 | 58 |
