|
Name : CFF8240_1810 (CFF8240_1810) Accession : YP_892917.1 Strain : Campylobacter fetus 82-40 Genome accession: NC_008599 Putative virulence/resistance : Virulence Product : KpsF/GutQ Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG0794 EC number : - Position : 1758500 - 1759480 bp Length : 981 bp Strand : - Note : identified by match to protein family HMM PF00571; match to protein family HMM PF01380; match to protein family HMM TIGR00393 DNA sequence : GTGATAGTAAATTTAAACGGAGAAAAAATGGATATTTTGAGTATCGCTAAAGAGGTATTAAGCTTAGAAGCAGATGAGTT AAAAAGACAAGTAGAATTACTGGATTTTAAATTTGAAAAGGCTGTAAATTTAGCACTTTCTTGCAAAGGAAAGCTCATAA TATCAGGCGTGGGTAAGAGTGGGCTTGTAGGAGCTAAGATAGCAGCCACTTTGGCAAGTACTGGAACTCCTAGCTTTTTT TTGCATCCTACTGAAGCGCTTCATGGCGATCTTGGTATGATAAGTCAAAACGACGCTGTTTTGGCTATTAGTTTTAGCGG TGAGAGCAGTGAACTTCTATTGATACTTCCGCACATTAAAAAGCGCGGTATAAAAATAATAGGAATGGCAAAAAGCGGCT CAAGTCTAGAGATGTTAAGCGATGCATTTATTAGTCTTGACATAGTCCGCGAAGCCTGTCCTTTGGGTGCCGCGCCTACT GTTTCTACTACTTTGACTTTGGCTTTAGGAGACGCTTTGGCTGTGTGTTTGATGCAATTAAAAGAATTTAAAAAAGAAGA TTTTGCTATGCTTCATCCAGGTGGTAGTCTTGGTAAGAGACTTTATCTAAAAGTAAAAGATGTGATGAGAAAAGATGAAT TGCCTATTGTTAGTGATGATGTTAGTTTAAAATTTGCGATTAATTCAATGACTCATGGTAAATTAGGCACGGTTTTACTA ACAAATAAAAACGGTTTGTTAGTAGCAGTTCTAAGCGATGGCGATCTAAGACGCGCATTGGGTAACGAGAATTTTAATAT AAATGATCAAGCTATTAAATTTGCTACTAAAAATCCAAAGGTGCTAGAAGATGAAAATATGCTAGCCTATGATGCTTTAA AACTCATAGAGGAGTATAAAATTCAAATTCTAATCATAACAAAAGATAAAAAACCAATCGGAGCTTTGCATATCCACGAT TTAACAAGTTTAGGACTATAA Protein sequence : MIVNLNGEKMDILSIAKEVLSLEADELKRQVELLDFKFEKAVNLALSCKGKLIISGVGKSGLVGAKIAATLASTGTPSFF LHPTEALHGDLGMISQNDAVLAISFSGESSELLLILPHIKKRGIKIIGMAKSGSSLEMLSDAFISLDIVREACPLGAAPT VSTTLTLALGDALAVCLMQLKEFKKEDFAMLHPGGSLGKRLYLKVKDVMRKDELPIVSDDVSLKFAINSMTHGKLGTVLL TNKNGLLVAVLSDGDLRRALGNENFNINDQAIKFATKNPKVLEDENMLAYDALKLIEEYKIQILIITKDKKPIGALHIHD LTSLGL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kpsF | AAZ04466.1 | polysialic capsule transport protein | Virulence | PAI I APEC-O1 | Protein | 5e-45 | 41 |
| kpsF | CAE85210.1 | KpsF protein | Virulence | PAI V 536 | Protein | 3e-45 | 41 |
| kpsF | YP_854329.1 | polysialic acid capsule synthesis protein KpsF | Not tested | PAI I APEC-O1 | Protein | 8e-45 | 41 |
