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Name : CFF8240_1723 (CFF8240_1723) Accession : YP_892841.1 Strain : Campylobacter fetus 82-40 Genome accession: NC_008599 Putative virulence/resistance : Unknown Product : type III effector HopAH2-2 Function : - COG functional category : R : General function prediction only COG ID : COG2194 EC number : - Position : 1681315 - 1682844 bp Length : 1530 bp Strand : + Note : identified by match to protein family HMM PF00884; match to protein family HMM PF08019 DNA sequence : ATGAAAATCAGCTCAAATATTTTTATATTGAGTTTTGCTCTTTTTATAACCTTGCTTAACTACAAATTTTTTGAATTTGC AATCAATAAAGCAGGTTTTTACGAAAACAAAATTGTTATTTTAACGCTTCCGGTGCTATTTTTTGCACTATTGATAATAG CTTTTAGCTTATTATTCCTACCTTATCTAACTAAACCATTATCAATTTTTATAGGTATTAGCGGAATTGCCGGAGCGTAC TTTATGAACACGTACGGCACAATAATAGATAGCGATATGATAAGAAATGCGGTGCAAACGGATGTAAAAGAGGTGAAAGA TCTACTAAATTGGGATATAATTTTATGGATTTTAGGCGCCGTTTTCGTCGTGATTATCGTAGTAAAAACGAAAATTATCT ATTCTAAGGTTTTGTACGAGATAAAAATCAGATCTATTTTTATAGTAGCGGCTTTAGCCATTTTCGGAGCTTCTTTTGGT ATATTTAGCAAAAACTTTATACCATTTTTTAGAAACTATCCGGAAATCAGGTTTTTTACAACTCCGTTTTATCCGATATA CTCTATAATTAAATTTACAAAATCACTAACTCCTAAAGCAGAATTTCAAAAAATAGGACTTGACGCAACTCTAAAAGATG ATAAAAAAAGATTATTTGTACTTGTAGTAGGAGAAACTGCGAGAGCTGCTAATTACTCGTTAAATAACTATATGAAAAAC GATACCAACCCATACTCGAAAGAAAACGGCGTACTTAGCTTCACGAACTTCTACTCATGCGGAACATCTACTGCTATAAG CGTACCTTGTATGTTTTCAAATTTAACAAAAAAAACATTTTCTCCAAGCAAAGCTAACAATACGGGTAATTTATTAGACG TATTTACTGTAGCAAATATTGATGTAAGCTGGTTTGGTAACAATTCTGGATGGTGCAAAGGAGTCTGCGATAGACTGCAA AACGCTAAAAATTACGGCGGAGAGGGCTTTGATGAAGTCATGCTAAAAGATATAAATTCCAAAATACAAAACGCTTCAAA AAACAGCTTTATAGTAGTTCATCTGCAAGGAAGCCATGGGCCAACTTACTTTAAAAGATATCCAAAAGAGTTTGATAAGT TCAACCCTACTTGCGATACTGCCGTACTAAAAGACTGTACGCATGATGAAATAGTAAATACATATGATAATACTATACTA TATACCGATTATGTTATGAATAAAATAATAAATATGCTAAAAGATTCTAAATTTGAGACCGGGCTCCTTTACGTAAGTGA TCACGGCGAGAGTTTGGGAGAAAACGGATTATACTTGCACGGTATGCCTTATGCTTTTGCTCCGGATTTTCAAATACATG TTCCTGCCATACTTTGGTTAAACGACAATAAAAAATTAGATGAATTGAGCAGATTAAAAGATGAGAATTTATCACAAGAC TATGTTTTTCACTCTATGCTTGGATTTTTTAGTATAGATTCAAACGTGTATGATAACAATCTGGACTTATTTGCTAAGGA TATAAAGTGA Protein sequence : MKISSNIFILSFALFITLLNYKFFEFAINKAGFYENKIVILTLPVLFFALLIIAFSLLFLPYLTKPLSIFIGISGIAGAY FMNTYGTIIDSDMIRNAVQTDVKEVKDLLNWDIILWILGAVFVVIIVVKTKIIYSKVLYEIKIRSIFIVAALAIFGASFG IFSKNFIPFFRNYPEIRFFTTPFYPIYSIIKFTKSLTPKAEFQKIGLDATLKDDKKRLFVLVVGETARAANYSLNNYMKN DTNPYSKENGVLSFTNFYSCGTSTAISVPCMFSNLTKKTFSPSKANNTGNLLDVFTVANIDVSWFGNNSGWCKGVCDRLQ NAKNYGGEGFDEVMLKDINSKIQNASKNSFIVVHLQGSHGPTYFKRYPKEFDKFNPTCDTAVLKDCTHDEIVNTYDNTIL YTDYVMNKIINMLKDSKFETGLLYVSDHGESLGENGLYLHGMPYAFAPDFQIHVPAILWLNDNKKLDELSRLKDENLSQD YVFHSMLGFFSIDSNVYDNNLDLFAKDIK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| Z1140 | NP_286675.1 | hypothetical protein | Not tested | TAI | Protein | 1e-64 | 42 |
| Z1579 | NP_287083.1 | hypothetical protein | Not tested | TAI | Protein | 1e-64 | 42 |
