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Name : CFF8240_1656 (CFF8240_1656) Accession : YP_892784.1 Strain : Campylobacter fetus 82-40 Genome accession: NC_008599 Putative virulence/resistance : Resistance Product : arsenical pump membrane protein Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG1055 EC number : - Position : 1626546 - 1627811 bp Length : 1266 bp Strand : - Note : identified by match to protein family HMM PF02040; match to protein family HMM PF03600 DNA sequence : ATGCTTATAGCCGCTTTTATATTTTTAATCACTATGGTTTTAGTTATATGGCAGCCAAAAGGTTTTGGAATCGGCACTTC AGCCGTTTTAGGAGCTGCTATGGCTTATATGTTTAATGTGGTTAGTGTTGATGATATTTTAGAAGTCGTAAGCATAGTTT GGGACGCGACTTTAACGTTTATCGGAATAATTTTATTTTCAATGGTTCTTGATAAGATAGGTTTTTTTGAGTGGAGTGCT CTTTTTGTTGCAAAACTTGCTAAAAATAGTGCGAAAAAGATGTTTATTTACTTGATTTTGCTCGGAGCTTTTGTTTCGGC TCTATTTGCAAATGACGCTGCTGCGCTTATTTTAACACCTATAATACTTGCCAAAATGAAAATTTTAAAACTAAATTTAA AAACCATAACCGCGTTTTTGTTATCAGGTGGATTTATCAGCGACGCAGCTTCTCTTCCTTTTGTCTTTTCAAATTTAACA AATATAATTACGGCAAACTACTATAAAATCAGCTTTTCAGCATATATGTATGATATGAGTTTTGCATTTATTGCTAGTGT TATAACTTCTACTTTGTTTTTATGGCTGATTTTTAGGCGAGATATACCGAAAAGTGTAAACGCAAGCCTATTAAAAGAAC CAAAAACAGCTATAAAAAGCGTTAAACTTTTTAAGTTTAGCTGGATATTTTTAATTATGCTTTTATGTGGTTATTTTTTA GGAGATTTTTTAGGACTTCCGGTGAGTTTGTTTGCTCTTGGAGGAGCTATTATATTTTTATGCGTAGCGGCAAAATCAAA AGTGGTAAGTGCAAAAGATCTACTAAAAACTGCTCCTTGGCAGATAGTGTGGTTTAGTATAGGTTTGTATGTTGTTGTTT TTGGACTTAAAAATGCAGGATTGTTGGAATTTGTTAGGGGTATTTTAGTTTATTTTAGCTCATTTGGGGAATTTTCTTTT GTGATGGCTAGTGGATTTCTTTCGGCTATTTTAAGCGCTGTTATGAATAATTTACCGGCTATCATGATAATGGATATTTC TCTTGATGGTATATCGAGTAAGGCTGCGATTTATGCAAATATAATAGGCTCGAATGTAGGAGTAAAACTAACTCCGTTTG GCTCTTTGGCTACATTGCTTTGGCTTTTTATACTGCAAAAAAACGGTATTCGTATAAGTATAAAAAGCTTTTTTAAATTT AGTTTTATGATAACTCCTCCAGTGCTTTTTGTTGTTTTAATTAGCATATATATCTGGGTTAGCTAG Protein sequence : MLIAAFIFLITMVLVIWQPKGFGIGTSAVLGAAMAYMFNVVSVDDILEVVSIVWDATLTFIGIILFSMVLDKIGFFEWSA LFVAKLAKNSAKKMFIYLILLGAFVSALFANDAAALILTPIILAKMKILKLNLKTITAFLLSGGFISDAASLPFVFSNLT NIITANYYKISFSAYMYDMSFAFIASVITSTLFLWLIFRRDIPKSVNASLLKEPKTAIKSVKLFKFSWIFLIMLLCGYFL GDFLGLPVSLFALGGAIIFLCVAAKSKVVSAKDLLKTAPWQIVWFSIGLYVVVFGLKNAGLLEFVRGILVYFSSFGEFSF VMASGFLSAILSAVMNNLPAIMIMDISLDGISSKAAIYANIIGSNVGVKLTPFGSLATLLWLFILQKNGIRISIKSFFKF SFMITPPVLFVVLISIYIWVS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| arsB | YP_005754065.1 | arsenical pump membrane protein | Not tested | Type-XI SCCmec | Protein | 2e-82 | 50 |
| SH0109 | YP_252024.1 | arsenical pump membrane protein | Not tested | SCCmec | Protein | 5e-86 | 50 |
| arsB | YP_252017.1 | arsenical pump membrane protein | Not tested | SCCmec | Protein | 6e-84 | 49 |
| arsB2 | YP_001007633.1 | arsenical pump membrane protein | Not tested | YAPI | Protein | 4e-74 | 47 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| CFF8240_1656 | YP_892784.1 | arsenical pump membrane protein | BAC0575 | Protein | 2e-87 | 51 |
| CFF8240_1656 | YP_892784.1 | arsenical pump membrane protein | BAC0574 | Protein | 2e-86 | 51 |
| CFF8240_1656 | YP_892784.1 | arsenical pump membrane protein | BAC0578 | Protein | 2e-76 | 47 |
| CFF8240_1656 | YP_892784.1 | arsenical pump membrane protein | BAC0031 | Protein | 9e-71 | 46 |
| CFF8240_1656 | YP_892784.1 | arsenical pump membrane protein | BAC0576 | Protein | 1e-75 | 46 |
| CFF8240_1656 | YP_892784.1 | arsenical pump membrane protein | BAC0577 | Protein | 3e-73 | 45 |
