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Name : CFF8240_0149 (CFF8240_0149) Accession : YP_891358.1 Strain : Campylobacter fetus 82-40 Genome accession: NC_008599 Putative virulence/resistance : Unknown Product : glycolate permease GlcA Function : - COG functional category : C : Energy production and conversion COG ID : COG1620 EC number : - Position : 129328 - 130923 bp Length : 1596 bp Strand : - Note : identified by match to protein family HMM PF02652; match to protein family HMM TIGR00795 DNA sequence : ATGACTAATGAAGTAAATTGGCTACATGCCGCTATTAGCGGGCTGCCTATTATTCTATTTTTTACAGCCTTAGTATGGCT GAAGCTAAAAGGTTGGGTGGCCGCAGCAGCTACGGTTACTCTAAGTTTTATCATAGCTATCACACTCAATGATATGTCCG TGATCAAGGCTTTAGCGTCGTTTGCAGGCGGATTTTTAAAAGGCTTATGGCCTATTGCGTGGATTATAATCGCCGCAATA TTTTTGTACAAACTTTCTGATAAGAGCGGATACTTTAACGTATTAAAACATAGTGTAATGAGTATAACTCCGGATCACAG AATTCAAGTTATATTGATCGCGTTTTGTTTTGGCTCGTTTTTAGAAGGCGCTATCGGATTTGGCGGACCTGTTGCTATAA CTGCGGCTTTGTTAGTTGGACTTGGCCTTCGCCCTTTATACGCTGCTGGTCTTTGTTTGATAGCAAATACCGCTCCAGTT GCATTTGGCGCTGTTGGAATTCCTATTATAGCTATGGCTCAAGCTGTAAATGTCGATCAAAACGTTATCTCCGCAATGGT AGGAAGAATGCTTCCGCCTGTTAGTCTTTTTGTTCCGTTTTTCATCGTATTTTTAATGGATGGATTTAAAGGAGTTAGGG AGACGTTTCCTGCTATATTTGTAGCTACTATCAGTTTTGCGGCGACACAGTTTTATAGTTCAAACCATATAGGACCGGAA CTTCCAGATATTATTTCGGCGATAGTATCCATCATAGTTACATCTGCATTTTTAAAAATTTGGAAACCAAAAAATATATT CAGAGTTGACAGAAGCGAATATAAAGATGATGGGCAATTAATACCTTTAAAAGATATTTGGTTAGCATGGGCGCCTTTTA TTATACTAGTAGTAGCCGTAATAATCTGGCAGATTCCTAGTTTCAAAGCACTATTTAAAACCGGAGGGATGTTTGAGTTT ACCGGTATGACATTTGTCATATATGAAGATATAAAATTTAGACTAGACTTAATACTTACAGCAGGTACGGCTATACTTTT AGCCGGCATAGTGAGCATATTTATACTAAGCGTAAATGCAAAAACAGTCGCTTTAGCAGCCAAAGATACTTTAAAAGAGA TGAAAATTCCGGTACTTACGATAGGTCTGGTGGTCGCTTACGCAGTTTTAGCCGAAAAAAGCGGTCAAGCAAGTCTTATG GGAACGGCTCTTGCTCAAACGGGCGACGCGTTTGCATTTTTCTCACCTATTATAGGTTGGTTAGGAGTATTTCTAACAGG CTCGGATACTAGCTCAAATTTACTATTTGGATCACTTCAAGTAGCAGCTGCAAACGCACTTATGAGTGCACCTGATGCGA CAATCAAGCAAGGTCTTGATGTACTGTTTTTAGCAGCAAATACGTTTGGGGGCGTAGTAGGTAAAATGATAAGTCCGCAG AGTATCGCTATAGCGTGTGCAGCTGTTGGTTTGGTAGGAAAAGAAAGCGATCTATTTAGATTTACAGTAAAATACTCGAT AGGATTCATAATAGCTTGTGGCGCTATAACTTATATAATAGCTCACTGGCTACCATTTATAATCCCGACTGCTTGA Protein sequence : MTNEVNWLHAAISGLPIILFFTALVWLKLKGWVAAAATVTLSFIIAITLNDMSVIKALASFAGGFLKGLWPIAWIIIAAI FLYKLSDKSGYFNVLKHSVMSITPDHRIQVILIAFCFGSFLEGAIGFGGPVAITAALLVGLGLRPLYAAGLCLIANTAPV AFGAVGIPIIAMAQAVNVDQNVISAMVGRMLPPVSLFVPFFIVFLMDGFKGVRETFPAIFVATISFAATQFYSSNHIGPE LPDIISAIVSIIVTSAFLKIWKPKNIFRVDRSEYKDDGQLIPLKDIWLAWAPFIILVVAVIIWQIPSFKALFKTGGMFEF TGMTFVIYEDIKFRLDLILTAGTAILLAGIVSIFILSVNAKTVALAAKDTLKEMKIPVLTIGLVVAYAVLAEKSGQASLM GTALAQTGDAFAFFSPIIGWLGVFLTGSDTSSNLLFGSLQVAAANALMSAPDATIKQGLDVLFLAANTFGGVVGKMISPQ SIAIACAAVGLVGKESDLFRFTVKYSIGFIIACGAITYIIAHWLPFIIPTA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| glcA | CAE85240.1 | GlcA protein, putative glycolate permease | Not tested | PAI V 536 | Protein | 2e-90 | 52 |
