Gene Information

Name : CFF8240_1381 (CFF8240_1381)
Accession : YP_892522.1
Strain : Campylobacter fetus 82-40
Genome accession: NC_008599
Putative virulence/resistance : Virulence
Product : general glycosylation pathway protein
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG2148
EC number : -
Position : 1359653 - 1360258 bp
Length : 606 bp
Strand : -
Note : identified by match to protein family HMM PF02397

DNA sequence : 
ATGTATAGAGCATTTTTTAAACGTTTTTTGGATTTTTTTGGATCTTTGGTTTTGATATTTTTAACGAGCCCTATTATGAT
ATGGGCATATTTTGCTATAAAAAAGCGTTTAGGAAGTCCGGTGATTTTCACTCAAAATAGACCTGGGCTGGGCGAAAAAA
TCTTTCAAATTTATAAATTTAGAACTATGAGCGATGAAAAAGATGAAAACGGCAAACTTCTAAGTGACGAGCTTCGTTTG
GGCGAATTTGGTAAAAAATTAAGATCTCTTAGTATAGATGAGCTACCGCAGCTTTTTAATGTTTTAAAAGGCGATATGAG
TTTTATAGGACCAAGACCTTTGCTCATCCAGTATTTGCCGCTTTATAACGATGAACAAAAGCTTCGACACACGGTAAGGC
CAGGTATAACCGGACTTGCTCAAGTAAATGGTAGAAACGGTATTAGCTGGGCGAAAAAGTTTGAATATGATAGCTACTAC
GCTAAAAATTTAAGTTTTTTAATGGATTTAAAAATAGCGTTTTTAACGGTTAAAAAAGTTATTAAAAAAGATGGTATAAG
TAAAGAAGGTATGGTTACTACTGAAGAGTTCAACGGAAATAATTAG

Protein sequence : 
MYRAFFKRFLDFFGSLVLIFLTSPIMIWAYFAIKKRLGSPVIFTQNRPGLGEKIFQIYKFRTMSDEKDENGKLLSDELRL
GEFGKKLRSLSIDELPQLFNVLKGDMSFIGPRPLLIQYLPLYNDEQKLRHTVRPGITGLAQVNGRNGISWAKKFEYDSYY
AKNLSFLMDLKIAFLTVKKVIKKDGISKEGMVTTEEFNGNN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SSP0070 YP_300160.1 capsular polysaccharide synthesis protein Not tested SCC15305cap Protein 7e-30 43
cap1N AAL26667.1 type 8 capsule synthesis gene Virulence SCCcap1 Protein 9e-29 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CFF8240_1381 YP_892522.1 general glycosylation pathway protein VFG1369 Protein 5e-19 42
CFF8240_1381 YP_892522.1 general glycosylation pathway protein VFG1309 Protein 5e-29 41