|
Name : glnA (CFF8240_1054) Accession : YP_892217.1 Strain : Campylobacter fetus 82-40 Genome accession: NC_008599 Putative virulence/resistance : Virulence Product : glutamine synthetase, type I Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG0174 EC number : 6.3.1.2 Position : 1053003 - 1054430 bp Length : 1428 bp Strand : + Note : identified by match to protein family HMM PF00120; match to protein family HMM PF03951; match to protein family HMM TIGR00653 DNA sequence : ATGGGCAAATTTGTAAATAACGTAAAAGAATTTTTTGAGTTCTGCAAGGAAAATGAAGTCAAATTTGTGGATTTTCGTTT CACGGACTTAAAAGGTACTTGGCATCACGTATCGTATAATATAAAAGCGATTAATGAAGATTCATTCAACGGACTTCCGT TTGATGGTAGTTCTATAGACGCTTGGCAGCCGATTCATAAATCAGATATGATGCTAAAACCAGATGTAGAAACTGCGTTT TTAGATCCTTTTACTGCAGATACGACTATTATAGTAATATGTGATGTTTATGACATATACAAAGGTGAATTATATGAAAA ATGTCCTAGAAGTATAGCAAAAAAGGCATCGCAATATCTAAGAGATAGCGGTGTAGGAGACGTAGCTTACTTTGGACCTG AAAATGAGTTTTTTGTATTTGACAATGTTCGCATTATAGATAAACCAAATTGCGCTATGTATGAAGTAGATACGGAAGAA GGCGAGTGGAATGATGGTAAAGAGTATACAGATGGATACAATACGGGTCACAGACCACGCACCAAAGGTGGATATTTTCC AGTTCAACCAGTCGATAGCATGGTGGATCTAAGAGCTGAAATGGTAAATGTACTTGAACAAGTAGGACTTGAAACTTTTG TGGTTCATCATGAAGTTGCTCAAGGACAAGGCGAAATAGGCGTCAAATTCGGCACACTTGTAGAGGCTGCGGATAATGTT CAAATTTATAAATATGTAGTAAAAATGGTAGCTCATCTAAACGGTAAAACAGCTACATTTATGCCAAAACCGCTTTATGG AGATAACGGAAGCGGTATGCACGTACATCAATCTATCTGGAAAGACGGTAAAAATTTATTTTATAAAGATGGAAATTATG CAAATCTTAGCGATATCGCAAGGTGGTATATAGGTGGTGTTTTAAAACACGCAAGAAGCGTGGCTGCATTTACAAACCCT AGTACAAATAGTTATAAAAGATTAATTCCGGGTTTTGAAGCTCCTAGCATTTTAACTTATTCTTGCCAAAACAGAAGCGC TAGTTGTCGTATTCCTTATGGTTCAGGAGAGAAAAGCGTTAGAGCGGAGTTTAGATTTCCAGATAGCACGGCTTGCCCAT ATTTAGCGTTTGCCGCTATGCTTCTAGCAGGGCTTGATGGTATAAAAAATAAAGTGGAACCTGTCGGTCCTATGGATGAA GATTTGTTTGAGCTAACTCTTGATGAGATAAGAGATCGAGGTATAGAGCAACTTCCTCACACTTTAAGAGGCAGCCTTGA AGCAGTTATCCGTGATAATAAATATCTAAGTCCCGCAATGAGCAATTTATTTATAGAAACATATCAACATTATAAATTTG AAACTCAAGTATGGCCTTATGAGCAAAGACCTACTCCGTTTGAGTTTAAAACTTCATTTTCTTGTTAG Protein sequence : MGKFVNNVKEFFEFCKENEVKFVDFRFTDLKGTWHHVSYNIKAINEDSFNGLPFDGSSIDAWQPIHKSDMMLKPDVETAF LDPFTADTTIIVICDVYDIYKGELYEKCPRSIAKKASQYLRDSGVGDVAYFGPENEFFVFDNVRIIDKPNCAMYEVDTEE GEWNDGKEYTDGYNTGHRPRTKGGYFPVQPVDSMVDLRAEMVNVLEQVGLETFVVHHEVAQGQGEIGVKFGTLVEAADNV QIYKYVVKMVAHLNGKTATFMPKPLYGDNGSGMHVHQSIWKDGKNLFYKDGNYANLSDIARWYIGGVLKHARSVAAFTNP STNSYKRLIPGFEAPSILTYSCQNRSASCRIPYGSGEKSVRAEFRFPDSTACPYLAFAAMLLAGLDGIKNKVEPVGPMDE DLFELTLDEIRDRGIEQLPHTLRGSLEAVIRDNKYLSPAMSNLFIETYQHYKFETQVWPYEQRPTPFEFKTSFSC |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| glnA | YP_003728749.1 | glutamine synthetase | Not tested | cag PAI | Protein | 4e-152 | 64 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| glnA | YP_892217.1 | glutamine synthetase, type I | VFG1399 | Protein | 5e-96 | 50 |
