|
Name : MSMEG_0900 (MSMEG_0900) Accession : YP_885303.1 Strain : Mycobacterium smegmatis MC2 155 Genome accession: NC_008596 Putative virulence/resistance : Virulence Product : eptc-inducible aldehyde dehydrogenase Function : - COG functional category : C : Energy production and conversion COG ID : COG1012 EC number : 1.2.1.3 Position : 986441 - 987964 bp Length : 1524 bp Strand : + Note : identified by match to protein family HMM PF00171 DNA sequence : ATGACAGTCTTTTCCCGCCCGGGTGCCGCAGACGCTCGCATGTCATTTGAGTCCCGTTACGACAATTTCATCGGCGGTGA GTGGGTGGCGCCCGTCGACGGCCGGTACTTCGAGAATCCGACGCCGGTCACGGGCCAGGTGTTCTGCGAGGTGGCCCGCT CCAGCTCGGCCGACATCGAGAAGGCCCTCGACGCCGCCCACGCGGCGGCGCCGGCGTGGGGCAAGACCGCTCCGGCCGAG CGTGCGCTGATCCTCAACCGCATCGCCGACCGCATGGAGCAGAACCTGGAGGCACTCGCGCTCGCGGAGGCGTGGGACAA CGGCAAGCCGATCCGCGAGACGCTCAACGCCGACATCCCGCTGGCGATCGACCACTTCCGCTACTTCGCCTCCGCGATCC GCGCGCAGGAGGGTTCCCTGAGCCAGGTCGACGAGGACACCGTGGCCTACCACTTCCACGAGCCGCTGGGTGTGGTCGGG CAGATCATCCCGTGGAACTTCCCGATCCTGATGGCCGTGTGGAAGCTCGCCCCGGCACTGGCCGCGGGCAACGCCGTTGT GCTCAAGCCCGCCGAGCAGACCCCTGCCTCGGTGCTGTACCTCATGTCGCTGATCGCGGACCTCGTGCCTGCAGGCGTGG TGAACATCGTCAACGGGTTCGGTGTGGAGGCCGGCAAGCCGCTGGCGTCGAGCAATCGCATCGCCAAGATCGCGTTCACC GGTGAGACCACCACGGGCCGGCTCATCATGCAGTATGCGTCGCAGAACCTGATCCCGGTCACGTTGGAGCTGGGCGGCAA GAGCCCCAACATCTTCTTCTCGGATGTCATGGCCGCCGCCGACGACTTCCAGGACAAGGCGTTGGAAGGGTTCACGATGT TCGCCCTCAACCAGGGCGAGGTGTGCACGTGCCCGTCGCGCTCGCTGATCCAGTCCGACATCTTCGACGAGTTCCTCGAG CTCGCCGCGATCCGCACCAAGGCCGTGCGTCAGGGCGACCCGCTGGACACCGAGACCATGATCGGCTCCCAGGCGTCCAA CGATCAGTTCGAGAAGATCCTGTCCTACATCGAGATCGGCAAGAGCGAGGGCGCACGCATCGTGACCGGCGGCGAGCGCG CCGACCTCGGCGGTGACCTCTCGGGTGGTTACTACATCCAGCCGACGATCTTCACCGGCCACAACAAGATGCGGATCTTC CAGGAGGAGATCTTCGGCCCGGTCGTGGCGGTCACGTCGTTCAGCGACTACGACGACGCGATCTCGATCGCCAACGACAC GCTGTACGGTCTCGGCGCCGGAGTGTGGAGCCGCGACGGGAACACCGCGTATCGTGCCGGGCGCGACATCAAGGCCGGCC GGGTGTGGACCAACTGCTACCACCAGTACCCGGCGCACGCCGCGTTCGGTGGGTACAAGCAGTCCGGCATCGGCAGGGAG AACCACAAGATGATGCTCGACCACTACCAGCAGACCAAGAACCTGCTGGTGAGCTACAGCGACAAGGCGCAGGGATTCTT CTGA Protein sequence : MTVFSRPGAADARMSFESRYDNFIGGEWVAPVDGRYFENPTPVTGQVFCEVARSSSADIEKALDAAHAAAPAWGKTAPAE RALILNRIADRMEQNLEALALAEAWDNGKPIRETLNADIPLAIDHFRYFASAIRAQEGSLSQVDEDTVAYHFHEPLGVVG QIIPWNFPILMAVWKLAPALAAGNAVVLKPAEQTPASVLYLMSLIADLVPAGVVNIVNGFGVEAGKPLASSNRIAKIAFT GETTTGRLIMQYASQNLIPVTLELGGKSPNIFFSDVMAAADDFQDKALEGFTMFALNQGEVCTCPSRSLIQSDIFDEFLE LAAIRTKAVRQGDPLDTETMIGSQASNDQFEKILSYIEIGKSEGARIVTGGERADLGGDLSGGYYIQPTIFTGHNKMRIF QEEIFGPVVAVTSFSDYDDAISIANDTLYGLGAGVWSRDGNTAYRAGRDIKAGRVWTNCYHQYPAHAAFGGYKQSGIGRE NHKMMLDHYQQTKNLLVSYSDKAQGFF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| VC0819 | NP_230467.2 | aldehyde dehydrogenase | Not tested | VPI-1 | Protein | 3e-141 | 62 |
| aldA | AAC12273.1 | aldehyde dehydrogenase | Virulence | VPI | Protein | 2e-148 | 61 |
| aldA | AAK20747.1 | aldehyde dehydrogenase | Virulence | VPI | Protein | 2e-148 | 61 |
| aldA | AAK20776.1 | aldehyde dehydrogenase | Virulence | VPI | Protein | 2e-148 | 61 |
| aldA-1 | YP_001216300.1 | aldehyde dehydrogenase | Not tested | VPI-1 | Protein | 1e-147 | 61 |
| ORF SG19 | AAN62241.1 | putative aldehyde dehydrogenase | Not tested | PAGI-3(SG) | Protein | 2e-68 | 44 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| MSMEG_0900 | YP_885303.1 | eptc-inducible aldehyde dehydrogenase | VFG0082 | Protein | 1e-141 | 62 |
