|
Name : thiC (MSMEG_0826) Accession : YP_885230.1 Strain : Mycobacterium smegmatis MC2 155 Genome accession: NC_008596 Putative virulence/resistance : Unknown Product : thiamine biosynthesis protein ThiC Function : - COG functional category : H : Coenzyme transport and metabolism COG ID : COG0422 EC number : - Position : 911327 - 912901 bp Length : 1575 bp Strand : - Note : required for the synthesis of the hydromethylpyrimidine moiety of thiamine DNA sequence : GTGACGACCGGCCCGATCACGGGGAGTACCAAGGCCTATCGCGAGGTGGAGCATCCGGGGGTGGACGTCCCGCTGCGGGT GCCGTTCCGCCGGGTCCACCTGAGCGACGGCGACCACCTCGACCTGTACGACACGTCCGGTCCGTACACCGACACCGACG CCGTCATCGACCTCGACGCGGGCCTGACACCGCGACCCGGGGTGGTGCGCGACCGCGGCACGCAGCTGCAACGCGCCCGT GCCGGTGAGATCACCGCCGAGATGGCGTTCATCGCCGAGCGCGAAGGCGTCCCCGCCGAACTGGTGCGTTCCGAGGTGGC ACGTGGGCGGGCGGTGATCCCGGCCAACCACAATCACCCCGAGAGCGAACCGATGATCATCGGCAAGGCCTTCGGCGTGA AAGTCAATGCGAACATCGGCAATTCGGCGGTCACATCGTCGATCGCCGAAGAAGTCGACAAGATGGTGTGGGCGACCCGC TGGGGTGCCGACACCATCATGGACCTGTCGACCGGTCGCGACATCCACCTGACGCGGGAATGGATCCTGCGCAACTCGCC GGTGCCGGTGGGCACCGTGCCCATGTACCAGGCACTGGAGAAGGTCAACGGCGACCCCACCAAGCTCAGCTGGGATGTCT ACCGCGACACCGTGATCGAGCAGTGCGAACAGGGCGTGGACTACATGACCGTGCACGCCGGTGTGCTGCTGCGGCACATC CCGCTGACGGTCGACCGGGTCACGGGCATCGTGTCACGCGGCGGGTCGATCATGGCGGCCTGGTGCCTGGCACATCACAC AGAGTCGTTCCTGTACACCAACTTCGAGGAACTGTGTGAGATCTTCGCACGCTACGACGTGACGTTCTCGCTGGGCGACG GCCTGCGCCCGGGGTCCATCGCCGACGCCAACGACGCGGCCCAATTCGCCGAACTGCGCACCCTCGGCGAGCTCACCACG ATCGCGAAAAACCATGGCGTGCAGGTGATGATCGAAGGCCCTGGCCACGTCCCCATGCACAAGATCGTCGAGAACGTGCG CCTCGAAGAGGAACTGTGTGACGATGCGCCGTTCTACACACTGGGACCGCTCGCGACCGACATCGCCCCGGCGTACGACC ACATCACCTCGGCGATCGGCGCGGCGATCATCGCCCAGGCAGGCACCGCGATGCTGTGCTACGTCACACCCAAGGAGCAT CTGGGCCTGCCCAACCGCCAGGACGTCAAGGACGGCGTGATCGCCTACAAGATCGCGGCGCACTCTGCCGACCTGGCCAA GGGCCATCCCCGCGCGCAACAGCGCGATGACGCACTGTCCAAGGCGCGCTTCGAGTTCCGGTGGCACGACCAGTTCGCGC TGTCGCTGGATCCCGACACCGCGCGCGAGTTCCACGACGAGACACTGCCCGCCGAACCGGCGAAGACCGCGCACTTCTGC TCGATGTGCGGGCCCAAGTTCTGCTCCATGCGCATCACGGCCGACCTCAAGGATTCGATCCGCGAGGCGATGGACCAGAA ATCCGCCGAGTTCGCCGAACAGGGGAACCGTGTGTATCTACCGTTGACATCGTGA Protein sequence : MTTGPITGSTKAYREVEHPGVDVPLRVPFRRVHLSDGDHLDLYDTSGPYTDTDAVIDLDAGLTPRPGVVRDRGTQLQRAR AGEITAEMAFIAEREGVPAELVRSEVARGRAVIPANHNHPESEPMIIGKAFGVKVNANIGNSAVTSSIAEEVDKMVWATR WGADTIMDLSTGRDIHLTREWILRNSPVPVGTVPMYQALEKVNGDPTKLSWDVYRDTVIEQCEQGVDYMTVHAGVLLRHI PLTVDRVTGIVSRGGSIMAAWCLAHHTESFLYTNFEELCEIFARYDVTFSLGDGLRPGSIADANDAAQFAELRTLGELTT IAKNHGVQVMIEGPGHVPMHKIVENVRLEEELCDDAPFYTLGPLATDIAPAYDHITSAIGAAIIAQAGTAMLCYVTPKEH LGLPNRQDVKDGVIAYKIAAHSADLAKGHPRAQQRDDALSKARFEFRWHDQFALSLDPDTAREFHDETLPAEPAKTAHFC SMCGPKFCSMRITADLKDSIREAMDQKSAEFAEQGNRVYLPLTS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00317 | YP_008207782.1 | Thiamine biosynthesis protein ThiC | Not tested | AbaR25 | Protein | 6e-153 | 59 |
| BJAB0868_00321 | YP_008211647.1 | Thiamine biosynthesis protein ThiC | Not tested | AbaR26 | Protein | 6e-153 | 59 |
