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Name : MSMEG_6845 (MSMEG_6845) Accession : YP_891049.1 Strain : Mycobacterium smegmatis MC2 155 Genome accession: NC_008596 Putative virulence/resistance : Virulence Product : trap dicarboxylate transporter dctm subunit Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG1593 EC number : - Position : 6894636 - 6895931 bp Length : 1296 bp Strand : - Note : identified by match to protein family HMM PF06808; match to protein family HMM TIGR00786 DNA sequence : GTGTCCATCGACCCCATCGCTGTGGGAATCCTCATCGGAGGATTCGCCGTGCTCATCCTGCTGCGCATCCCGATCGCCCT GGCGCTCGCGCTGGCGGCGGTGTTCGAGGCGTTCTATCTCGACCTGCCGCTGCCCATCGTCGGGCAACGGATGGTCGCGG GCCTCGACATCTTCGCGCTGCTCGCCATCCCGTTCTTCATCCTCGGGGGCGAGATCATGGCCGCCGGCGGGATCTCCCGG CGACTGATCGCGTTCGCGAGTCTGTTCGTCGGCTGGCTGCGCGGCGGCCTCGCGATGATCAACATCGGTTCCAGTACCTT CTTCGGTGCACTGTCGGGTTCGTCGGTCGCCGACGTCTCGGCCATCGGGTCGGCGACCATCCCGATGATGAAACAGAAAG GGTACGACGCCGATTACGCCGTCTGCGTGACCATCACCGGAGCCGCTCAGGCCGTGATGATTCCGCCCAGCCACAACCTG GTGATCTTCTCGATGGCCGCGGGCGGGGTGTCGATCGGTGCCCTGTTCGTCGCAGGCATCGTCCCCGGTCTGCTGATCGG CTTGTCGCTTCTGGTGCTGGCCTACCTGCTCGCCGTCCGCCGTGGGTACCCCAAGGAGACCCTCGTCCCGGTCAGTGAGG TCCCACGCATCGTGTGGGAAGGGCTGCTGAGCCTGCTGATGCCGGTGATCATCCTCGGCGGAATCCTCAGTGGCATCTTC ACGGCGACCGAGTCCGCGGCCATCGGCTGTGTCTACGCCTTCTTCCTGACCTTCTTCGTTTACCGCGACATCCCGCTGTC GGGCTTCATCCCGATCCTCCAGCGCACCGCACGAACGCTCGGGATCGTGCTGTTCATCATCGCGGCGGCCGGGGCGTTCG GGTATTTCCTGACCTTCCTCCAGGTCCCCGAGGCGGTCACCCAAGCACTATTGGGCCTCTCGGACAACAAGATCGTCATC CTGCTGGTGATCAACCTGCTGCTGCTCGCGCTCGGCGCCGTGATGGACATGGCACCACTGATCTTGATCATGACGCCGAT CCTGCTGCCGGTCGCCACGAGTATCGGGATGGACCCGGTCCAGTTCGGCATCATGCTGCTGCTCAACCTCGCCATCGGTC TCATCACGCCGCCGGTCGGCAACGTCCTGTTCGTCGGGGCTGCGATCGGCCAGATCTCGATCGAGAAAGTCTCACGGGCA CTCCCGGTGTTCCTGGTCCCCATGCTCTTGGTGCTCCTGCTCATCACGTTCCTGCCGCAGTTGTCCCTGGCCCTACCGGG CCTGCTCGGCCTCTAG Protein sequence : MSIDPIAVGILIGGFAVLILLRIPIALALALAAVFEAFYLDLPLPIVGQRMVAGLDIFALLAIPFFILGGEIMAAGGISR RLIAFASLFVGWLRGGLAMINIGSSTFFGALSGSSVADVSAIGSATIPMMKQKGYDADYAVCVTITGAAQAVMIPPSHNL VIFSMAAGGVSIGALFVAGIVPGLLIGLSLLVLAYLLAVRRGYPKETLVPVSEVPRIVWEGLLSLLMPVIILGGILSGIF TATESAAIGCVYAFFLTFFVYRDIPLSGFIPILQRTARTLGIVLFIIAAAGAFGYFLTFLQVPEAVTQALLGLSDNKIVI LLVINLLLLALGAVMDMAPLILIMTPILLPVATSIGMDPVQFGIMLLLNLAIGLITPPVGNVLFVGAAIGQISIEKVSRA LPVFLVPMLLVLLLITFLPQLSLALPGLLGL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| VC1777 | NP_231412.1 | hypothetical protein | Not tested | VPI-2 | Protein | 1e-42 | 42 |
| VC0395_A1375 | YP_001217318.1 | hypothetical protein | Not tested | VPI-2 | Protein | 1e-42 | 42 |
| VPI2_0025c | ACA01842.1 | TRAP dicarboxylate transporter DctM subunit | Not tested | VPI-2 | Protein | 8e-43 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| MSMEG_6845 | YP_891049.1 | trap dicarboxylate transporter dctm subunit | VFG1110 | Protein | 5e-43 | 42 |
