|
Name : MSMEG_6297 (MSMEG_6297) Accession : YP_890515.1 Strain : Mycobacterium smegmatis MC2 155 Genome accession: NC_008596 Putative virulence/resistance : Virulence Product : aldehyde dehydrogenase Function : - COG functional category : C : Energy production and conversion COG ID : COG1012 EC number : - Position : 6363136 - 6364671 bp Length : 1536 bp Strand : + Note : identified by match to protein family HMM PF00171 DNA sequence : ATGACAGTCACCACCTTCCGCCCGTCCGACGTCGCCACCCTCACGAACCCGGACGCCGCCTCCGACGTCGCCGATCTGTC GATGTTCATTGCCGGAGAGGCGGTTTCCGCTGCCGACGGCGCCACGTTCGACTCCTACGAACCCCGCTCCGGGCGGGTGT GGGCACGGTTGCCGCGGGCCAATTCGACCGACATCGACCGTGCCGTGCGCGCGGCGCGCGCAGCCTTCGAAGGGCCGTGG GGCGCTGTGTCGCCCGCCGACCGCGGCCGATTCCTGATGAAGATCGCCGCAGTGGTCGACCGGCACCGGGATCAACTCAC GGTCATCGAGTCCCGCGACAACGGCAAACCGGTCCGCGAGGTGCGTGCCGAGATCGACGCGGTCGTACGCTATTTCGAGT ACTTCGCGGGTGTGTGCCAGACGACGGTGGGTGAGACCCATCCCCAGGCGGCCACGGCCTTCAGCTACACCCGCCGCGAA CCGGTGGGTGTGGTCGGCGCGATCGTGCCCTGGAACTCGCCGCTGCTCATGCTCGCGTGGAAGCTGTCGCCCGCCCTGGC AGGCGGTAACACCATCATCCTCAAACCCGCCGAGGAGACCTCGGTCTCCGCGGTCGTGTTCGCTCAGCTCATCGCCGAGG TGGGACTGCCCGACGGAGTCTTCAACGTGGTGACCGGAATCGGCGAGGAAGCCGGCGCCGCGCTGGTCGCCCATCCGGAT GTCGACAAGATCGCCTTCACCGGTTCGACCGAGGTGGGCAAGCAGATCGCGGCCACCGCGGCAAGCGATCTCAAACTCGT CACCTTCGAACTGGGCGGCAAGTCACCCACCGTGATCTTCGACGACGCCGACCTCGATGCCGCGGTTCACCGCACCGCTT ACGGCATCTTCTCGGCCGCGGGTCAGACCTGTCAGGCGGCATCGCGAATCTTCGTCCAGGACACCATCCACGACGAATTC CTGGACCGGTTCGCCGCACTGGCACGGCGCATCCGCGTGGGCGATCCGCTGTCCGAGCGCACCCAGATGGGCGCCCAGAT TTCCGCACAGCATCGCGAACGGATCGCCGGGTACGTCGCCAGCGGCATCCAGGAGGGAGCGAATCTGGTCTGCGGCGGCA CGCAGCCCACGGAAGCCCCGCTGGCGCAGGGCTACTACTACTCGCCGACCATCCTCGACGGCGTCAACCGCGACATGCGG ATGATCCGCGAGGAGATCTTCGGGCCGGTGACCGGTGTCATGTCATTCACCGACGAGGCCGACGCCGTGGCCAAGGCGAA TGACACGGAGTACGGCCTGGCCGGATCGGTGTGGACGCGGGACGTGTCCCGCGCGCACCGGGTCGCGGCGAGCATTGCGG CCGGACTGATCTGGGTCAACACCACCCGCACCATCAACCACCTCGTTCCGTTCGGCGGCTACAAGCAGTCCGGTTACGGG CGCGAGGGCGGACAGGCCGTGATGGAGCACTACACCCGGATCAAGTCGGTGTGGGTGGACATGCAGGACGACCTGCCGAA CTGGTACGCCGACTGA Protein sequence : MTVTTFRPSDVATLTNPDAASDVADLSMFIAGEAVSAADGATFDSYEPRSGRVWARLPRANSTDIDRAVRAARAAFEGPW GAVSPADRGRFLMKIAAVVDRHRDQLTVIESRDNGKPVREVRAEIDAVVRYFEYFAGVCQTTVGETHPQAATAFSYTRRE PVGVVGAIVPWNSPLLMLAWKLSPALAGGNTIILKPAEETSVSAVVFAQLIAEVGLPDGVFNVVTGIGEEAGAALVAHPD VDKIAFTGSTEVGKQIAATAASDLKLVTFELGGKSPTVIFDDADLDAAVHRTAYGIFSAAGQTCQAASRIFVQDTIHDEF LDRFAALARRIRVGDPLSERTQMGAQISAQHRERIAGYVASGIQEGANLVCGGTQPTEAPLAQGYYYSPTILDGVNRDMR MIREEIFGPVTGVMSFTDEADAVAKANDTEYGLAGSVWTRDVSRAHRVAASIAAGLIWVNTTRTINHLVPFGGYKQSGYG REGGQAVMEHYTRIKSVWVDMQDDLPNWYAD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hpaE | AAO17179.1 | HpaE | Not tested | tcd island | Protein | 1e-86 | 42 |
| ORF SG19 | AAN62241.1 | putative aldehyde dehydrogenase | Not tested | PAGI-3(SG) | Protein | 4e-83 | 42 |
| unnamed | AAK01506.1 | putative aldehyde dehydrogenase | Not tested | PAGI-1 | Protein | 2e-77 | 41 |
| VC0819 | NP_230467.2 | aldehyde dehydrogenase | Not tested | VPI-1 | Protein | 3e-86 | 41 |
| aldA | AAC12273.1 | aldehyde dehydrogenase | Virulence | VPI | Protein | 5e-87 | 41 |
| aldA | AAK20747.1 | aldehyde dehydrogenase | Virulence | VPI | Protein | 5e-87 | 41 |
| aldA | AAK20776.1 | aldehyde dehydrogenase | Virulence | VPI | Protein | 5e-87 | 41 |
| aldA-1 | YP_001216300.1 | aldehyde dehydrogenase | Not tested | VPI-1 | Protein | 1e-86 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| MSMEG_6297 | YP_890515.1 | aldehyde dehydrogenase | VFG0082 | Protein | 1e-86 | 41 |
