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Name : amt (MSMEG_6259) Accession : YP_890478.1 Strain : Mycobacterium smegmatis MC2 155 Genome accession: NC_008596 Putative virulence/resistance : Unknown Product : ammonium transporter Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG0004 EC number : - Position : 6323614 - 6324864 bp Length : 1251 bp Strand : + Note : identified by match to protein family HMM PF00909; match to protein family HMM TIGR00836 DNA sequence : ATGGATACCGGAACAACAGCATTCATGCTGTGTTGCATCATCGGGCTCACGCTGATGATCCCTGGCCTGGCGTTGTTCTA CGGCGGCATGGTCTCGGTCAAGAGCTCGACCAACATGATGATGATGACCTTCGGCGCGGTCGCCGTCGTCGGCCTGCTGT GGGTCCTCTTCGGGTTCTCCATGGTGTTCGGTACGTCCTACGGCGGATTCGTGGGCAGTTTCACCGAATTCGCCGGCCTG ACCGACCTTCTCGAACCCATGACCACCGTCGACGGGCTGCCGGTCAGCTTGTTCGCGGTGTTCCAGGCGCTGTTCGCGGC GATCACCGTGGCGCTGATCTCCGGTGCGGTGGCCGACCGCATGAAGTTCGGCGCCTGGATGGTGTTCGCGGCGTTCTGGG CCGTGCTGGTGTACTTCCCCGTCGCGCACTGGGTTTTCGCGTTCGACGGCACGGTCACCGAGGATTCGGTCGGCGGCTGG ATCGCCAACAGGCTCGGTGCGGTCGACTTCGCGGGCGGTACCGCGGTGCACATCAACGCCGGCGCGGCCGCGCTCGCGCT GGCGATCGTGCTGGGCAAGTCCGCGATGTTCGGACGGCGCAAGCCTCACAACGTTCCGCTCACGCTCCTCGGCGCGGGCA TGCTGTGGGCCGGTTGGTATGCGTTCAACGGCGGTTCGGCGCTGTCGGCCGGTAACTCCGCGGCCATCGTCATGGTCACC ACGTTCGTGGCGACCTGCGCTGCGGTCCTGGCGTGGATCGCCGTCGAGAAGGTCAAGACCGGTCACGTGACCGGGGTCGG CGCGGCCTCGGGTGCCATCACGGGCCTGGTCGCCATCACGCCCGCGTGCGGCGCGGTGACGCCGATCGGCGCGATGTTCG TCGGCGGTATCGCGGGCGCGGTGTGCGTGTACGCCGTGGGTCTGAAAGACACGTTCGGGTACGACGATTCGCTCGACGTG GTCGGTGTGCACCTCGTCGGCGGCCTGATCGGCACGCTGCTCATCGGCTTCTTCGCCAGCGAGGGCATGCCCAACGGCGT CAACGGTCTGTTCTATGGCGGCGGCATCGACCAGTTGTGGAAGCAGGCGGTCGCGGCCGGTGCGGTGATGATCTATTCGT TCGTGCTCGCGTACGTCATCGCGTTCGCGATCAAGAAGACCATGGGCATCCGCATCTCCCCCGACGAGGAAGAAAAGGGT ATCGACGCCAAGTTCCACCGCGACGCGGCGTACGAGCTCGAATTCGCCTGA Protein sequence : MDTGTTAFMLCCIIGLTLMIPGLALFYGGMVSVKSSTNMMMMTFGAVAVVGLLWVLFGFSMVFGTSYGGFVGSFTEFAGL TDLLEPMTTVDGLPVSLFAVFQALFAAITVALISGAVADRMKFGAWMVFAAFWAVLVYFPVAHWVFAFDGTVTEDSVGGW IANRLGAVDFAGGTAVHINAGAAALALAIVLGKSAMFGRRKPHNVPLTLLGAGMLWAGWYAFNGGSALSAGNSAAIVMVT TFVATCAAVLAWIAVEKVKTGHVTGVGAASGAITGLVAITPACGAVTPIGAMFVGGIAGAVCVYAVGLKDTFGYDDSLDV VGVHLVGGLIGTLLIGFFASEGMPNGVNGLFYGGGIDQLWKQAVAAGAVMIYSFVLAYVIAFAIKKTMGIRISPDEEEKG IDAKFHRDAAYELEFA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00287 | YP_008207752.1 | Ammonia permease | Not tested | AbaR25 | Protein | 8e-36 | 42 |
| BJAB0868_00291 | YP_008211617.1 | Ammonia permease | Not tested | AbaR26 | Protein | 8e-36 | 42 |
