Gene Information

Name : MSMEG_6062 (MSMEG_6062)
Accession : YP_890284.1
Strain : Mycobacterium smegmatis MC2 155
Genome accession: NC_008596
Putative virulence/resistance : Virulence
Product : Fe uptake system permease
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1120
EC number : -
Position : 6129763 - 6130554 bp
Length : 792 bp
Strand : -
Note : identified by match to protein family HMM PF00005

DNA sequence : 
ATGACGGCGGAGGTGCGGCTGCACCGGATCTCGGTGGTGATGTCGACGATGCGCCGCAACCGACCCGTCGTCGACGGTGT
CTCGCTGCGTGTCGCGCCGGGTGAGATGGTCGCGGTCGTCGGCCCGAACGGGGCCGGGAAGACGACTCTTCTGCGCACCA
TCTACCGCGCGCAACGCCCCACGGCAGGCAATGTGCTGATCGACGGTGCCGATCTGTGGAAGCTGCCACGTAAGCGGGCC
GCACAGCGGGTCGCGGCGGTACTTCAGGAGATGACGACGGATTTCGAGCTCACCGTGTACGACATCGTGGCCATGGGCCG
CACGCCGTACAAACGCTCGTTCGAATCCGACAACGCCACCGACCGCGAGATCATCGCCTCGGCACTGGCGGCGCTCGACA
TCGCCGATCTGGCTCACGCGCCGTTCGGCAGGCTCTCGGGTGGGCAGAAGCAACGTGTGCTGATCGCGCGGTCACTGGCA
CAACACACCGATGTCATCGTGTTGGACGAGCCGACGAATCATCTGGATCTGCGTCATCAACACGACACGCTGCGCCTTCT
GCGTGCCACCGGATCGACGGTCATCGCGGCGCTGCACGACCTCAATCTCGCCGCCGCCTATTGCGACCGCATCTGCGTGC
TCGATCGCGGGCAGGTGGTCGCCGTCGGTGCCCCGCGTGAGGTCCTGACCGTCGAGCTGCTCGCGGAGGTCTACGGGGTC
GACGCCACGATCGGCGATACCGCGGGGGTTCCTCAGATCACGGTGGTACCCGGACAGGCGGCTCCGCGGTGA

Protein sequence : 
MTAEVRLHRISVVMSTMRRNRPVVDGVSLRVAPGEMVAVVGPNGAGKTTLLRTIYRAQRPTAGNVLIDGADLWKLPRKRA
AQRVAAVLQEMTTDFELTVYDIVAMGRTPYKRSFESDNATDREIIASALAALDIADLAHAPFGRLSGGQKQRVLIARSLA
QHTDVIVLDEPTNHLDLRHQHDTLRLLRATGSTVIAALHDLNLAAAYCDRICVLDRGQVVAVGAPREVLTVELLAEVYGV
DATIGDTAGVPQITVVPGQAAPR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CDCE8392_1767 YP_005134301.1 iron complex transport system ATP-binding protein Virulence Not named Protein 7e-40 46
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 2e-29 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
MSMEG_6062 YP_890284.1 Fe uptake system permease BAC0164 Protein 1e-29 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
MSMEG_6062 YP_890284.1 Fe uptake system permease VFG1042 Protein 9e-30 41