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Name : ctaD (MSMEG_4437) Accession : YP_888712.1 Strain : Mycobacterium smegmatis MC2 155 Genome accession: NC_008596 Putative virulence/resistance : Unknown Product : cytochrome C oxidase subunit I Function : - COG functional category : C : Energy production and conversion COG ID : COG0843 EC number : 1.9.3.1 Position : 4521629 - 4523380 bp Length : 1752 bp Strand : - Note : identified by match to protein family HMM PF00115; match to protein family HMM TIGR02891 DNA sequence : TTGACGACCCACGCTCCATCGGCAGGAGAACTCCTGGCGCGGAGACCGTTTCCGCAACGGCTCGGCCCCAGGTGGACGCT GCTGTACAAGTTGGTGACCACAACCGACCACAAGTTGATCGGGATGATGTACGTCGTCGCGTGCTTCATCTTCTTCTTCA TCGGCGGATTGATGGCACTGCTGCTCCGCACCGAGTTGGCGGTACCCGGCCTGCAGTTCCTCTCCAACGAGCAGTACAAC CAGCTGTTCACCATGCACGGCACGGTGATGCTGCTGTTCTATGCCACTCCCATCGTGTTCGGGTTCGCCAACCTCGTGGT GCCTCTGCAGATCGGCGCCCCCGATGTGGCGTTTCCGCGACTGAATGCGTTGTCGTTCTGGCTCTTTCTCTTCGGTGCGT CGATCGCACTCGGCGGCTTCCTCGCCCCGGGTGGGCCCGCCGACTTCGGGTGGACCGCCTACACCCCGCTGTCGAACGCC ATGCACTCGCCGGGCGCGGGTGGTGATCTGTGGATCTTCGGATTGATCGTCGGTGGACTGGGCACCATCCTCGGTGCGGT CAACATGATCACCACGGTGGTGTGCATGCGCGCACCGGGCATGATCATGTTCCGGATGCCGATCTTCACCTGGAACATCC TGGTGACCAGCGTGATCGTGCTGGTCGCTTTCCCGCTTCTGACCTCGGCGCTGTTCGGCCTGGCCGCGGACCGCAATCTG GGCGCACACGTCTTCGACCCGGCCAACGGCGGGACCATGTTGTGGGAGCACCTGTTCTGGTTCTTCGGCCATCCCGAGGT CTACATCATCGCGTTGCCCTTCTTCGGCATCGTCACCGAGATCTTCCCGGTGTTCTCCCGCAAACCGGTCTTCGGCTACA CCACGCTGGTCTACGCCACCATCTCCATCGGAGCTCTGTCGATCGCGGTGTGGGCCCACCACCTCTACGCCACCGGCGCG GTGCTGCTGCCGTTCTTCTCCTTCATGACGTTCATGATCGCGGTGCCGACCGGGATCAAATTCGTCAACTGGATCGGCAC CATGTGGAAGGGCCAGTTGACGTTCGAGACGCCGATGTTGTTCTCGGTGGGCTTTCTCGTGACGTTCCTGCTCGGTGGGC TCACCGGGGTGATCCTGGCCAGCCCGCCACTGGACTTCCACGTCACCGACAGCTATTTCGTCGTGGCGCACTTCCATTAC GTGCTGTTCGGCACGATCGTCTTCGCAACGTACGCCGGGGTGTACTTCTGGTTTCCGAAGATGACGGGCCGACTGCTGGA TGACCGGCTCGGCAAGCTGCACTTCTGGCTGACCCTCATCGGATTCCACACCACATTCCTGGTGCACCACTGGCTCGGCG CAGAAGGCATGCCACGCCGATACGCCGACTACCTGCCCACCGACGGGTTCACCACCCTCAACATCGTTTCCACCATCGGT TCGTTCATCCTGGGCGTCTCGATGCTGCCGTTCGTGTGGAACGTGTTCAAGAGCTGGCGATACGGCGAGCCCGTCACGGT CGACGATCCGTGGGGCTACGGCAACTCCCTGGAGTGGGCCACCAGCTGCCCGCCGCCGCGGCACAACTTCACCGAGCTGC CCAGAATCCGTTCCGAGCGACCAGCTTTCGAGTTGCACTATCCCCACATGATCGAGCGGCTTCGTGCCGAGTCCCACCCC GGGCGCACCCAGGGAGGACCCGGTGCGGTGACGCTTCCACAACCACAGGCGAGGAGCCATCCCGTTGAATGA Protein sequence : MTTHAPSAGELLARRPFPQRLGPRWTLLYKLVTTTDHKLIGMMYVVACFIFFFIGGLMALLLRTELAVPGLQFLSNEQYN QLFTMHGTVMLLFYATPIVFGFANLVVPLQIGAPDVAFPRLNALSFWLFLFGASIALGGFLAPGGPADFGWTAYTPLSNA MHSPGAGGDLWIFGLIVGGLGTILGAVNMITTVVCMRAPGMIMFRMPIFTWNILVTSVIVLVAFPLLTSALFGLAADRNL GAHVFDPANGGTMLWEHLFWFFGHPEVYIIALPFFGIVTEIFPVFSRKPVFGYTTLVYATISIGALSIAVWAHHLYATGA VLLPFFSFMTFMIAVPTGIKFVNWIGTMWKGQLTFETPMLFSVGFLVTFLLGGLTGVILASPPLDFHVTDSYFVVAHFHY VLFGTIVFATYAGVYFWFPKMTGRLLDDRLGKLHFWLTLIGFHTTFLVHHWLGAEGMPRRYADYLPTDGFTTLNIVSTIG SFILGVSMLPFVWNVFKSWRYGEPVTVDDPWGYGNSLEWATSCPPPRHNFTELPRIRSERPAFELHYPHMIERLRAESHP GRTQGGPGAVTLPQPQARSHPVE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cur_1478 | YP_001800872.1 | cytochrome c oxidase subunit I | Not tested | Not named | Protein | 6e-177 | 72 |
