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Name : MSMEG_4357 (MSMEG_4357) Accession : YP_888632.1 Strain : Mycobacterium smegmatis MC2 155 Genome accession: NC_008596 Putative virulence/resistance : Unknown Product : ABC transporter ATP-binding protein Function : - COG functional category : R : General function prediction only COG ID : COG1123 EC number : - Position : 4444837 - 4446417 bp Length : 1581 bp Strand : + Note : identified by match to protein family HMM PF00005 DNA sequence : ATGACGGATCTGAAGACCAACGCCCCGGTACTCAGTGTCCGTGACCTCACGGTCGGTATCGGACGACGCGAGATCGTGCA TGGGGTGTCGTTCGACGTGCACCGCGAACAGACCGTGGGCATCGTCGGTGAATCCGGATCCGGGAAGTCGCTGACGGTGC TCGCGGCCACCGGCCTGCTCGACGCGCCAGGTGCGGTGGTCAGGGGCACCAGCACCCTGGCCGACGGCTCCCAACTCGTC GGCGCATCGGCGCGGTTGCTGCGTTCGGTGCACGGCGGGCGCATCGGGTTCGTGTTCCAGGACCCGGGCACGTCGCTGAA TCCGCTGCTGACGCTCGAGCGTCAGATCACCGAATCGCTTGAGACGCACCGCAAGATGTCGCGCCGGCAGGCCCGCACTC GCGCCGGTGAGCTGCTGGAGGCCGTCGGGTTGCCACCTCAGCGACTCGATGCCTACCCGCACCAGTTGTCCGGTGGGCAG CGGCAGCGCGTCATGATCGCGATCGCGCTCGCGTGCGACCCGGAACTGCTCATCGCCGACGAACCCACCACCGCACTGGA TGTCACGACGCAGGCCCAGATCGTCGACCTGGTGGCCGATTTGCAGCGCGACTTCGGCGCGGCGGTGGTGTGGATCAGCC ACGATCTCGGCGTGATCGGACAGGTCGCCGACGAGGTGACGGTGCTGCGCGACGGTGACGCGGTCGAACAGGCCCCCGTT ATGGACGTGTTCGACCGGCCGCGCCACGAGTACACCAGGGAACTGCTGGCCGCGCGTCCGCGCGTCGACGACGCCGGTCC CCCGGCGCCGCCCGACGACGCCGGGATCCTGTTGGACGTCGCCGATCTGGAGGTCCGGTACGCCGACGTCGCTGCGGTCA AGGGCGTGTCGTTCACGATCCGGCGCGGTACCACACTGGGCCTGGTCGGCGAGTCCGGTTCGGGCAAGTCGACCGTGGCG GCCGCGCTTACCGGTCTGTCCGAACCGTCCGCGGGCACGGCCACACTCGACGGCGCCGACGTGTTCGGCGGTGGAAGCGA GCTGCGCAGGCGGATCAGCCTGGTGTTCCAGGACCCGTTCAGTTCACTGAACCCGCGGGCGCGAGTCGGCACGACCATCG GTGAGCCGTTACAGGTGCACGGCCTGGCCAAGGGCAGGCGGGCACGCGCCGAGCGGGTCGCCGAGCTGCTCGAACTGGTC GGGCTGCCCGGCGATTTCGCGTCCCGGTACCCGCACGAGCTGTCCGGTGGCCAGCGTCAGCGGGTCAGCATCGCGCGGGC GCTGGCCACCGAACCGGAGCTGCTCATCCTCGACGAATCGACGGCCTCGCTGGACGTGTCGGTGCAGTCCCGCGTGCTGG ACCTGCTGGCCGATCTGCAACGCGAGCTCGGCCTGGCCTACCTGTTCATCGCGCACGATCTGGCGGTCGTGCATCGCATG AGCCACGACGTGCTGGTGTTGCGCGACGGTGAGGTGGTCGAATACCGGCCCGCGGCGGAGTTGTTCGCCGCGCCGCAGCA CGAGTACACCCGCACGCTGCTGGCCGCGGTTCCGCCGCTGCGGCCGCATGAGAAGGTCTAG Protein sequence : MTDLKTNAPVLSVRDLTVGIGRREIVHGVSFDVHREQTVGIVGESGSGKSLTVLAATGLLDAPGAVVRGTSTLADGSQLV GASARLLRSVHGGRIGFVFQDPGTSLNPLLTLERQITESLETHRKMSRRQARTRAGELLEAVGLPPQRLDAYPHQLSGGQ RQRVMIAIALACDPELLIADEPTTALDVTTQAQIVDLVADLQRDFGAAVVWISHDLGVIGQVADEVTVLRDGDAVEQAPV MDVFDRPRHEYTRELLAARPRVDDAGPPAPPDDAGILLDVADLEVRYADVAAVKGVSFTIRRGTTLGLVGESGSGKSTVA AALTGLSEPSAGTATLDGADVFGGGSELRRRISLVFQDPFSSLNPRARVGTTIGEPLQVHGLAKGRRARAERVAELLELV GLPGDFASRYPHELSGGQRQRVSIARALATEPELLILDESTASLDVSVQSRVLDLLADLQRELGLAYLFIAHDLAVVHRM SHDVLVLRDGEVVEYRPAAELFAAPQHEYTRTLLAAVPPLRPHEKV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| oppDF2 | YP_005681814.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 4e-78 | 41 |
| oppDF2 | YP_005683914.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 4e-78 | 41 |
| cpfrc_01561 | YP_003783961.1 | hypothetical protein | Not tested | PiCp 6 | Protein | 4e-78 | 41 |
| oppDF2 | YP_005686002.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 4e-78 | 41 |
| dppD | YP_005160017.1 | putative peptide ABC transport system ATP-binding protein | Not tested | Not named | Protein | 4e-87 | 41 |
