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Name : MSMEG_4098 (MSMEG_4098) Accession : YP_888380.1 Strain : Mycobacterium smegmatis MC2 155 Genome accession: NC_008596 Putative virulence/resistance : Unknown Product : ABC transporter ATP-binding protein Function : - COG functional category : R : General function prediction only COG ID : COG1123 EC number : - Position : 4175512 - 4177173 bp Length : 1662 bp Strand : - Note : identified by match to protein family HMM PF00005 DNA sequence : ATGACCCCATCTGCCGTCCTGTCGGTTCAGGACCTCACCGTCGGCTACCGGCTCGGCGGGCAGGTCCGCCCCGTCGTGCA CGAGGTCAGCTTCGAGGTCGAACCGGGCCAGGTGCTCGCGCTGGTCGGGGAGTCCGGGTCCGGCAAGACCACCACCGGAC ACGCGATCCTCGGACTGCTGCCCGACAACGGTGCGGTGCTCGGCGGGCGGATCGCGTTCCGCGGCCAGGACCTCACCACT CTGAGGGCCAAGGCGTGGCGTCAGATCCGCGGCGGCTCAGTGGGTCTGATCCCGCAGGATCCGACGATCTCGCTGGATCC GGTGCGCCGCGTCGGCCACCAGGTCGAGGATGTGCTGCGGCTGCACACCGACCTCGATGATGACGCACGCCGTGACCGGG TGTACGAGTTGTTCGAACTGGTCGGCTTCACCGATGTCGAGCGCCGCTATCGGCAGTATCCGCACGAACTGTCCGGAGGA ATGCGCCAACGGGTGCTGGTCGCGGCCGCGGTGGCCGGCGACCCGGATCTGATCATCGCCGACGAGCCCACTTCGGGGTT GGACGCGACGGTGCAGAAGCAGGTGCTCGACCTCATCGACACCCTGCGGGTCGGGTCGTCCACCAGCATCGTGCTGGTCA CCCACGACCTCGGGGTGGCTGCCGATCGCTCGGACCTGATCGGGGTGATGCGGCAGGGCCGCATTGTCGAGCTGGGCCCC ACCGCCGACGTCATCGCCGACGCCCAGCATCCCTACACCCGCCGGCTGCTCGACAGCGTGCCACGAAAAGACCTCTCCGC ACGAAAGATCGAGACGCCGAAGCGGGACACTGACGTCGCGATCGAAGTGAACCAATTGAGCAAGATCTACGGCGACGTTG CCGCGGTCGATGGCATCTCTTTTTCGGTCCAACGTGGGCAGACATTCGCGATCGTCGGCGAATCCGGCAGCGGCAAGTCC ACCACGGCGCGTGTCCTGGCCGGGGTGACGCCGGCGACCTCGGGCCGCATCGACATCCTCGGTACCGAGGTCACCGGATT GGGGCGGCGCGCCTACCGTCCGCTGCGACGCTGCATCCAGGTCGTCTACCAGAATCCGTACTCCTCGTTCGACCCGCGAT TCGATGTGTTCGATGTGGTGGAGGAGCCGTTGCGGTCATTCCAGCAGGCGTCGCTTCTGCCCGGTTCGGCGCGACGTCGA CGCCGGGAGAACGCCGACCGGGTCGCGGCGGCGCTTGAGGCGGCGGCTCTGTCACCGGACTTCGCCGCCAGGCATCCGCG GGAACTCTCGGGCGGTCAACGGCAACGGGTGGCGATTGCGCGGGCGTTGGTAGTCGAGCCAGAGATCATCCTGCTCGACG AGCCCACGTCGGCGTTGGATGTGTCGGTGGCCGCTCAGATTCTGGATTTGCTGCAACAGCTGCAGGTCGACCGGGGGCTC ACCTACGTGTTCATCTCCCACGATCTGGCGGTGGTGTCGGCGATCTCCGATCAGGTGGCGGTCATGCGCCAGGGCCGCAT CGTCGAACAGGGAAGCACCGACCAGGTTTTCACTTCACCGCGCGATCCCTACACCGTCGCGCTGCTGGGCGCGATCGCGG GCCGCGAGCTCGCGGCTACAGCGACCAGCCGGTCGAGCACCGGCACGCCAGGAGCACCGTGA Protein sequence : MTPSAVLSVQDLTVGYRLGGQVRPVVHEVSFEVEPGQVLALVGESGSGKTTTGHAILGLLPDNGAVLGGRIAFRGQDLTT LRAKAWRQIRGGSVGLIPQDPTISLDPVRRVGHQVEDVLRLHTDLDDDARRDRVYELFELVGFTDVERRYRQYPHELSGG MRQRVLVAAAVAGDPDLIIADEPTSGLDATVQKQVLDLIDTLRVGSSTSIVLVTHDLGVAADRSDLIGVMRQGRIVELGP TADVIADAQHPYTRRLLDSVPRKDLSARKIETPKRDTDVAIEVNQLSKIYGDVAAVDGISFSVQRGQTFAIVGESGSGKS TTARVLAGVTPATSGRIDILGTEVTGLGRRAYRPLRRCIQVVYQNPYSSFDPRFDVFDVVEEPLRSFQQASLLPGSARRR RRENADRVAAALEAAALSPDFAARHPRELSGGQRQRVAIARALVVEPEIILLDEPTSALDVSVAAQILDLLQQLQVDRGL TYVFISHDLAVVSAISDQVAVMRQGRIVEQGSTDQVFTSPRDPYTVALLGAIAGRELAATATSRSSTGTPGAP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| dppD | YP_005160017.1 | putative peptide ABC transport system ATP-binding protein | Not tested | Not named | Protein | 4e-100 | 44 |
