Gene Information

Name : MSMEG_2937 (MSMEG_2937)
Accession : YP_887256.1
Strain : Mycobacterium smegmatis MC2 155
Genome accession: NC_008596
Putative virulence/resistance : Unknown
Product : pyridoxal biosynthesis lyase PdxS
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0214
EC number : -
Position : 2999713 - 3000624 bp
Length : 912 bp
Strand : +
Note : with PdxT forms pyridoxal 5'-phosphate from glutamine, either ribose 5-phosphate or ribulose 5-phosphate, and either glyceraldehyde 3-phosphate or dihydroxyacetone phosphate

DNA sequence :
GTGGAAACCGCGGCGCAAAACGGTTCGAGCAACCAGACCGGGACCGCGCGCGTGAAGCGCGGGATGGCCGAGATGCTCAA
GGGCGGCGTGATCATGGACGTGGTCACCCCGGAGCAGGCGCGTATCGCCGAGGCCGCCGGTGCGGTCGCGGTGATGGCGC
TGGAGCGCGTGCCCGCTGACATCCGCGCGCAGGGCGGGGTGTCGCGGATGAGCGATCCCGACATGATCGAGGGCATCATC
GACGCCGTCACGATCCCGGTGATGGCCAAGGCCCGCATCGGACACTTCGTGGAGGCCCAGATCCTGCAGAGCCTCGGTGT
GGACTACGTCGACGAGTCCGAGGTGCTCACGCCCGCCGACTACACCAACCACATCGACAAGTGGAAGTTCACCGTGCCGT
TCGTGTGCGGTGCGACCAACCTGGGCGAGGCGCTGCGCCGCATCACCGAGGGTGCGGCGATGATCCGCTCCAAGGGCGAG
GCCGGCACCGGCGACGTCTCGAACGCGACCACGCACATGCGCAAGATCGGCGGCGAGATCCGTCGGCTGACCTCGATGAG
CGAGGACGAGCTCTATGTCGCGGCCAAGGAGTTGCAGGCGCCCTACGAGCTGGTGGTCGAGGTGGCCCGGGCAGGCAAGT
TGCCGGTGACACTGTTCACCGCGGGTGGCATCGCCACCCCGGCTGACGCGGCGATGATGATGCAGCTCGGCGCCGAGGGG
GTCTTCGTCGGGTCGGGCATCTTCAAATCGGGCAACCCCGAGCAGCGGGCCGCGGCGATCGTGAAGGCCACGACGTTCTA
CGACGACCCGGACGTGCTGGCCAAGGTGTCGCGTGGTCTGGGTGAGGCCATGGTGGGTATCAACGTCGAGGAGATCGCCC
AGCCGCACCGGCTCGCAGAACGCGGCTGGTAA

Protein sequence :
METAAQNGSSNQTGTARVKRGMAEMLKGGVIMDVVTPEQARIAEAAGAVAVMALERVPADIRAQGGVSRMSDPDMIEGII
DAVTIPVMAKARIGHFVEAQILQSLGVDYVDESEVLTPADYTNHIDKWKFTVPFVCGATNLGEALRRITEGAAMIRSKGE
AGTGDVSNATTHMRKIGGEIRRLTSMSEDELYVAAKELQAPYELVVEVARAGKLPVTLFTAGGIATPADAAMMMQLGAEG
VFVGSGIFKSGNPEQRAAAIVKATTFYDDPDVLAKVSRGLGEAMVGINVEEIAQPHRLAERGW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
pdxS YP_005137204.1 pyridoxine biosynthesis protein Not tested Not named Protein 2e-110 83
DIP0227 NP_938620.1 pyridoxal biosynthesis lyase PdxS Not tested Not named Protein 2e-110 83
pdxS YP_005141805.1 pyridoxine biosynthesis protein Not tested Not named Protein 3e-110 83