|
Name : MSMEG_2839 (MSMEG_2839) Accession : YP_887159.1 Strain : Mycobacterium smegmatis MC2 155 Genome accession: NC_008596 Putative virulence/resistance : Unknown Product : transcriptional accessory protein Function : - COG functional category : K : Transcription COG ID : COG2183 EC number : - Position : 2899010 - 2901400 bp Length : 2391 bp Strand : + Note : identified by match to protein family HMM PF00575 DNA sequence : GTGCCTACGTCCGGTCCTGTCCCCGGCGTCCGATCGATCACCGCCCGGCTGGCCGAGGAGCTGTCCGTCGGTGAGCACCA GGTGGCTGCGGCCATCCACCTGCTCGACGAGGGCTCGACGGTGCCGTTCATCGCGCGTTACCGCAAGGAGGTCACGGGAA GCCTCGACGACGGTCAGCTGCGCACCCTGGAGGAGCGCCTGGCGTATCTGCGCGAGCTCGACGCGCGCCGTGAGGCCGTG CTGGCCTCGATCGAGGAGCAGGGCAAGCTCACCGACGAGCTGCGCGCAGCACTTGTCGCCGCGGACACCAAGGCCCGCGT CGAAGACATATACCTGCCGTACAAGCCCAAGCGCCGCACCAAGGCGCAGATCGCCAGGGAAGCCGGCCTGGAGCCGCTGG CGGACCGGCTGCTCGCCGATCCGAACCTGGTGCCCGAGGAGGTGGCGGGGGAGTTCCTCAACGAGAACGTCGCCGACGCC GCCGCCGCGCTCGAGGGTGCGCGCCACATCATCATCGAGCGCGCGTCCGAGGATGCCGAGCTGGTCGGTGCCACGCGTGA GAAGTTCTGGTCCGAGGGTTCGCTGCGCACCGCGCCGTTCTCCGAGGAGGCCGCGAAAAGCCCTGCCGCACAGAAGTTCC GTGACTACTTCGAGTTCTCCGAACCGCTGGAGCAGATGCCGTCGCACCGCGTGCTCGCGGTGCTGCGTGGCGAGAAGGAG CAGGCCCTGTCGCTGACGTTCGACGGCGGCGAGGACGAGGCCTACCAGGCGATGATCGCCCAGGCGCTCGGCATCGACAT GACCTCGCCTGCGCCGGCGACGCCGTGGCTGGCCACCACCGTGCGGCTGGCATGGCGCGCCAAACTGATGATCTCGGCGT CGGTCGACGCGCGGATCCGGCTGCGCCAGCGCGCCGAGGAGGACGCCGTCGCGGTGTTCGCCCGCAACCTCAAGGACCTG CTGCTGGCCGCACCGGCCGGTACCCGCACCACGCTCGGCCTGGACCCGGGCTTCCGCACCGGCGTCAAGGTCGCCGTCGT CGACGGCACCGGCAAGGTGCTGGAGACCTGCGCGATCTACCCGCACCAGCCGCAGAAGCAGTGGGATCAGGCCAAGGCCA CGCTCGGCGCGCTGATCGCCCGCCACGGCGTCGAACTCATCGCGATCGGCAACGGCACCGCATCACGCGAAACCGATGCG CTGGCTTCCGAACTCATCGCCGACATCCGCAAATCCGGCGCGAATCCGCCGATCAAGGCCATGGTCAGCGAGGCGGGCGC CTCGGTGTACTCGGCATCGGCCTACGCCGCGCGCGAACTTCCCGATCTCGACGTGACCGTGCGTGGTGCGGTGTCGATCG CGCGGCGCCTGCAGGACCCGCTGGCCGAACTGGTGAAGATCGACCCGAAGTCCATCGGTGTCGGCCAGTACCAGCACGAC GTCACACCCGGGTCGCTCGCGCGCAGCCTCGACGCGGTCGTCGAGGACGCCGTGAACGCCGTCGGCGTCGACCTCAACAC GGCCTCGGTACCGCTGCTCGCGCGCGTCTCGGGTGTCACCGAATCGCTGGCCGAGGCCATCGTCGCGCACCGCGAGAGCA CCGGGCCGTTCCGCAACCGCAAGGCGCTGCTGGACGTTCCTCGCCTGGGCCCCAAGGCTTTCGAACAGTGCGCGGGCTTC CTGCGCATCCGCGACGGCGAGGATCCGCTCGACGCGTCCGGTGTGCACCCGGAGTCCTACCCGGTGGTGCGCCGCATCCT GGACCGCGCAGGTGTCACGCTCGCCGAACTGATCGGGGACACCCGCACGCTGCGCACTCTCAAACCGGCCGAGTTCGCCG ACGACCGGTTCGGTGTCCCGACGGTCACCGACATCATCGGCGAGTTGGAAAAGCCCGGCCGGGACCCGCGTCCGGCGTTC TCGACGGCCACCTTCGCCGCGGGCGTCGAGAAGGTCGCCGACCTCAAGCCCGGCATGATCCTCGAAGGCGTCGTGACCAA CGTCGCGGCGTTCGGCGCGTTCGTCGACGTGGGTGTGCACCAGGACGGTCTGGTGCACGTCTCGGCGATGGCCGACCGCT TCGTCTCCGATCCGCACGAGGTGGTGAAGTCGGGTCAGGTGGTCAAGGTCAAGGTCGTCGACGTCGACGTCGATCGCCAG CGCATCGGTCTGAGCCTGCGCCTCAACGACGAACCCGACAAGGGCAAGCGCAACGACCGTCGCGACGGCGGGCAGAACCG CAACCAGAACCGCGGCGGCGGTCAGCGCAACAAGGGCGGCAACAGCGGTGGGAACAAGGGCGGCAACAACCGCGGCAACA AGGGCGGCCGCCGGGACCAGCCCATGGGGTCGATGGCTGAGGCGCTGCGCAACGCCGGTTTCGGCCGGTAG Protein sequence : MPTSGPVPGVRSITARLAEELSVGEHQVAAAIHLLDEGSTVPFIARYRKEVTGSLDDGQLRTLEERLAYLRELDARREAV LASIEEQGKLTDELRAALVAADTKARVEDIYLPYKPKRRTKAQIAREAGLEPLADRLLADPNLVPEEVAGEFLNENVADA AAALEGARHIIIERASEDAELVGATREKFWSEGSLRTAPFSEEAAKSPAAQKFRDYFEFSEPLEQMPSHRVLAVLRGEKE QALSLTFDGGEDEAYQAMIAQALGIDMTSPAPATPWLATTVRLAWRAKLMISASVDARIRLRQRAEEDAVAVFARNLKDL LLAAPAGTRTTLGLDPGFRTGVKVAVVDGTGKVLETCAIYPHQPQKQWDQAKATLGALIARHGVELIAIGNGTASRETDA LASELIADIRKSGANPPIKAMVSEAGASVYSASAYAARELPDLDVTVRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHD VTPGSLARSLDAVVEDAVNAVGVDLNTASVPLLARVSGVTESLAEAIVAHRESTGPFRNRKALLDVPRLGPKAFEQCAGF LRIRDGEDPLDASGVHPESYPVVRRILDRAGVTLAELIGDTRTLRTLKPAEFADDRFGVPTVTDIIGELEKPGRDPRPAF STATFAAGVEKVADLKPGMILEGVVTNVAAFGAFVDVGVHQDGLVHVSAMADRFVSDPHEVVKSGQVVKVKVVDVDVDRQ RIGLSLRLNDEPDKGKRNDRRDGGQNRNQNRGGGQRNKGGNSGGNKGGNNRGNKGGRRDQPMGSMAEALRNAGFGR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| NMB0075 | NP_273139.1 | transcriptional accessory protein Tex | Not tested | IHT-A | Protein | 0.0 | 60 |
