Gene Information

Name : MSMEG_2819 (MSMEG_2819)
Accession : YP_887147.1
Strain : Mycobacterium smegmatis MC2 155
Genome accession: NC_008596
Putative virulence/resistance : Unknown
Product : ISMsm1, transposase orfA
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2881499 - 2881834 bp
Length : 336 bp
Strand : -
Note : similar at the protein level to ISRru1 in the IS Finder database.; identified by similarity to GP:16551202; match to protein family HMM PF01527

DNA sequence :
GTGGCTGCGCCGAGAAAGTTCGACCAAGAGACCCGTGAGCGGGCAGTTCGGATGTATGAGGACCGGATCGCGGAGTTCGG
TGGTTCCAAGCGGGAAGCTCGTCGCCATGTGGGCGAGCTGCTGGGCATCAATGAGGCGACGTTGCGCAATTGGGTCGAGA
ACCGCCACGGTAGCGGGAGGCCTGCAGCGGGCGCGGTGATGTCTTCGGCAGGCGATAAGGACGCGGAGCTGGCCGCGCTG
CGCAAGGAGAATGCTGAATTGCGCAGAGCCAACGAGATTCTCAAGACAGCATCGGCGTTTTTCGCCGCGGCGGAGGTCGA
CCGCCGACTGCGGTGA

Protein sequence :
MAAPRKFDQETRERAVRMYEDRIAEFGGSKREARRHVGELLGINEATLRNWVENRHGSGRPAAGAVMSSAGDKDAELAAL
RKENAELRRANEILKTASAFFAAAEVDRRLR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CDBH8_0928 YP_005160020.1 transposase-like protein Not tested Not named Protein 9e-13 47
tnp7109-26 YP_001800854.1 transposase for insertion sequence Not tested Not named Protein 5e-12 44
CDCE8392_1775 YP_005134309.1 transposase-like protein Not tested Not named Protein 2e-10 44
CDC7B_2036 YP_005163477.1 hypothetical protein Not tested Not named Protein 2e-10 42
CDCE8392_1959 YP_005134490.1 hypothetical protein Not tested Not named Protein 8e-11 42
CDHC03_0162 YP_005137211.1 transposase-like protein Not tested Not named Protein 0.006 42