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Name : MSMEG_2818 (MSMEG_2818) Accession : YP_887146.1 Strain : Mycobacterium smegmatis MC2 155 Genome accession: NC_008596 Putative virulence/resistance : Unknown Product : ISMsm1, transposase orfB Function : - COG functional category : L : Replication, recombination and repair COG ID : COG2801 EC number : - Position : 2880573 - 2881502 bp Length : 930 bp Strand : - Note : This gene is similar at the protein level with ISRru1 in the IS Finder database.; identified by similarity to GP:16551202; match to protein family HMM PF00665 DNA sequence : GTGATCGTCGACTACATCGACGCTTACCGCCACCGGTTCGGGGTCGACCCGATCTGCGCCGTGCTCTCCGAGCACGACAT GCCGATCGCCCCGTCCACCTACTACGCGGCCAAGGCTCGCGGTCCGGTCAGCGACGCGGCCTGGGCCGAGGCGCACGCCG CCAACGCCGTCCATACGGTGTTCTGGGCCAACCGGGGTCTGTATGGGGTCCGCAAGATGTGGCATGCGATGCGACACGCT GGTCACGACATGGGCCGCGATCAGGTGGCCCGGCTGATGCGCATCTGTGGAATCTCGGGCGCGGTGCGCGGCAAACGCCG CACCATCACCACCGCCTCCGAGCAGGGTGCACCACGGCACCCGGATTTGATCGAGCGCAAGTGGGGCCTGCCGGTGCGCC CGGATCAGTGGTGGGTGGCTGATTTCACCTACACCTGGACGCTGGCGGGGTTCGTCTACACGGCGTTCTGTGTCGACGTG TTCTCCCGACGCATTCTGGGCTGGCGGGTGATGTCGACCAAGGCCACTCCGCTGGTGACCAGTGTGCTCGAGCAGGCGGT GTTCACTCGTCGTAGGACTGATTTCCGTTTCACTACAACGGGTTTGGTGCACCACTCGGATGCGGGAAGCCAATACACAT CGCTGGCTTTCACCGACGCACTGCGCGACTCAGGGATCGCCGGCTCGATCGGATCGGTCGGCGACGCGCTCGACAACGCG TTGATGGAATCGGCGATCGGCCTCTACAAGACCGAGCTGATCGACCGCCACCAATCCTGGACCGGGCGTGCCGAAGTCGA ACGCGAAACCGCGGCCTGGGTGCACTGGTACAACACCGACCGCCTGCACTCCTCCCTGAGCTACCAGTCGCCGATCGACT ACGAGGCCCAGTACCGTAATGACGCCGCCTCAACACCGGAGGTGGCCTAA Protein sequence : MIVDYIDAYRHRFGVDPICAVLSEHDMPIAPSTYYAAKARGPVSDAAWAEAHAANAVHTVFWANRGLYGVRKMWHAMRHA GHDMGRDQVARLMRICGISGAVRGKRRTITTASEQGAPRHPDLIERKWGLPVRPDQWWVADFTYTWTLAGFVYTAFCVDV FSRRILGWRVMSTKATPLVTSVLEQAVFTRRRTDFRFTTTGLVHHSDAGSQYTSLAFTDALRDSGIAGSIGSVGDALDNA LMESAIGLYKTELIDRHQSWTGRAEVERETAAWVHWYNTDRLHSSLSYQSPIDYEAQYRNDAASTPEVA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAL67406.1 | putative transposase | Not tested | PAI II CFT073 | Protein | 4e-39 | 46 |
| c5178 | NP_757026.1 | transposase IS629 | Not tested | PAI II CFT073 | Protein | 2e-43 | 43 |
| c5213 | NP_757061.1 | transposase IS629 | Not tested | PAI II CFT073 | Protein | 1e-43 | 42 |
| ECO111_3721 | YP_003236061.1 | putative IS629 transposase OrfB | Not tested | LEE | Protein | 7e-44 | 42 |
| ECO111_3776 | YP_003236111.1 | putative IS629 transposase OrfB | Not tested | LEE | Protein | 7e-44 | 42 |
| unnamed | AAL67398.1 | putative transposase | Not tested | PAI II CFT073 | Protein | 2e-43 | 42 |
| APECO1_3499 | YP_854312.1 | transposase for IS629 | Not tested | PAI I APEC-O1 | Protein | 3e-43 | 42 |
| IS629 | CAC37926.1 | transposase for IS629 | Not tested | LEE | Protein | 2e-41 | 42 |
| IS629 | CAI43821.1 | transposase for IS629 | Not tested | LEE | Protein | 2e-41 | 42 |
| IS629 | CAI43909.1 | transposase for IS629 1 | Not tested | LEE | Protein | 2e-41 | 42 |
| ECO103_3585 | YP_003223443.1 | IS629 transposase OrfB | Not tested | LEE | Protein | 5e-41 | 42 |
| Z1660 | NP_287162.1 | transposase for IS629 | Not tested | TAI | Protein | 1e-42 | 42 |
| ORF_34 | AAZ04444.1 | putative IS629 transposase | Not tested | PAI I APEC-O1 | Protein | 3e-43 | 42 |
| Z1198 | NP_286733.1 | transposase | Not tested | TAI | Protein | 7e-43 | 42 |
| Z1638 | NP_287141.1 | transposase | Not tested | TAI | Protein | 7e-43 | 42 |
| IS629 | CAI43840.1 | transposase for IS629 | Not tested | LEE | Protein | 7e-41 | 42 |
| Z1221 | NP_286756.1 | transposase | Not tested | TAI | Protein | 6e-43 | 42 |
| unnamed | CAD42083.1 | hypothetical protein | Not tested | PAI II 536 | Protein | 1e-42 | 41 |
| tnp7109-25 | YP_001800853.1 | transposase for insertion sequence | Not tested | Not named | Protein | 1e-49 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| MSMEG_2818 | YP_887146.1 | ISMsm1, transposase orfB | VFG1602 | Protein | 6e-43 | 41 |
