Gene Information

Name : MSMEG_2150 (MSMEG_2150)
Accession : YP_886506.1
Strain : Mycobacterium smegmatis MC2 155
Genome accession: NC_008596
Putative virulence/resistance : Unknown
Product : transposition helper protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1484
EC number : -
Position : 2225109 - 2225963 bp
Length : 855 bp
Strand : -
Note : identified by match to protein family HMM PF01695

DNA sequence :
ATGACCCCCACGCCACGGACCGCCAAGAACACCGCCACCGTCACCGAGGAGCCGCCGTCGACGGCGGCCAGCCGCTATCA
GAAGCTGCGTTCACATCTGGCTGAGCTCAAACTGCACGCCGCCGCCGCGGCGCTGCCCGCCGTGCTCGACCAGGCCAGCG
CCGAGAACCTGTCACTGACCGTGGCGTTGGAGCGGCTGCTGGCGGTCGAGGTCGAGGCCAGCACCGCCCGGCGGCTGGCT
GGGCGGCTGCGGTTCGCCTGCCTGCCCACCCCGGCCACCCTCGATGATTTCGACGTCGATGCAGCCGCCGGCATCGACCG
CAAGCTCATCGACGAACTGGGCACCTGCCGTTACCTCGAGTCGGCGACCAACATTCTGCTCGTCGGCCCGCCGGGCACCG
GGAAGACGCACCTGTCGGTGGGGTTGGCAAGGGCGGCAGCGCATGCCGGGTATCGGACCTACTTCACCACTGCCGCCGAT
CTGGCAGCTCGGTGCCATCGCGCGGCGATTGAGGGGCGCTGGGCCACCACCATGCGGTTCTACGCCGGCCCCACCCTGTT
GGTGATCGATGAACTGGGCTATTTGCCGCTGCCTGCCGAGGCCGCCTCGGCGTTGTTTCAGGTTGTCTCCCAACGGTATT
TGAAAACCAGCATCGTGATCACGACCAATCGTGGTGTCGGATCCTGGGGAGAGATCCTCGGCGACACCACCGTGGCCGCC
GCCATGCTCGACCGCCTCCTGCACCGCTCGGTGGTCATCAACCTCGACGGCGAGTCCTACCGCCTTCGCGACCACCAGGC
CGCCGCGGAAACCCTCCGCCGCGCCACCACCGGCACCCGCCAAGCACTACACTGA

Protein sequence :
MTPTPRTAKNTATVTEEPPSTAASRYQKLRSHLAELKLHAAAAALPAVLDQASAENLSLTVALERLLAVEVEASTARRLA
GRLRFACLPTPATLDDFDVDAAAGIDRKLIDELGTCRYLESATNILLVGPPGTGKTHLSVGLARAAAHAGYRTYFTTAAD
LAARCHRAAIEGRWATTMRFYAGPTLLVIDELGYLPLPAEAASALFQVVSQRYLKTSIVITTNRGVGSWGEILGDTTVAA
AMLDRLLHRSVVINLDGESYRLRDHQAAAETLRRATTGTRQALH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
y1093 CAD66188.1 transposase Orf B, insertion element IS100 Not tested PAI III 536 Protein 7e-31 42
unnamed CAB46598.1 IS100 transposase Not tested HPI Protein 5e-31 42
s0036 CAD33774.1 ORF B protein Not tested PAI I 536 Protein 5e-31 42
y1093 CAD42087.1 OrfB protein of IS100 transposase Not tested PAI II 536 Protein 5e-31 42
orfB CAE85183.1 OrfB protein, transposase, IS100 Not tested PAI V 536 Protein 5e-31 42
api84 CAF28558.1 putative transposase Not tested YAPI Protein 5e-31 42
YPTB1586 YP_070114.1 transposase/IS protein Not tested HPI Protein 7e-31 42
y1093 CAC43411.1 IS100 transposase; transposase ORFA Not tested PAI III 536 Protein 5e-31 42
unnamed CAA21402.1 - Not tested HPI Protein 7e-31 42
aec58 AAW51741.1 Aec58 Not tested AGI-3 Protein 5e-31 42
YPO1901 YP_002346891.1 transposase/IS protein Not tested HPI Protein 7e-31 42
y2410 NP_669717.1 transposase/IS protein Not tested HPI Protein 7e-31 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
MSMEG_2150 YP_886506.1 transposition helper protein VFG1663 Protein 4e-31 42
MSMEG_2150 YP_886506.1 transposition helper protein VFG1515 Protein 3e-31 42
MSMEG_2150 YP_886506.1 transposition helper protein VFG1627 Protein 3e-31 42
MSMEG_2150 YP_886506.1 transposition helper protein VFG1606 Protein 3e-31 42