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Name : MSMEG_1858 (MSMEG_1858) Accession : YP_886224.1 Strain : Mycobacterium smegmatis MC2 155 Genome accession: NC_008596 Putative virulence/resistance : Unknown Product : transposition helper protein Function : - COG functional category : L : Replication, recombination and repair COG ID : COG1484 EC number : - Position : 1936170 - 1937024 bp Length : 855 bp Strand : + Note : identified by match to protein family HMM PF01695 DNA sequence : ATGACCCCCACGCCACGGACCGCCAAGAACACCGCCACCGTCACCGAGGAGCCGCCGTCGACGGCGGCCAGCCGCTATCA GAAGCTGCGTTCACATCTGGCTGAGCTCAAACTGCACGCCGCCGCCGCGGCGCTGCCCGCCGTGCTCGACCAGGCCAGCG CCGAGAACCTGTCACTGACCGTGGCGTTGGAGCGGCTGCTGGCGGTCGAGGTCGAGGCCAGCACCGCCCGGCGGCTGGCT GGGCGGCTGCGGTTCGCCTGCCTGCCCACCCCGGCCACCCTCGATGATTTCGACGTCGATGCAGCCGCCGGCATCGACCG CAAGCTCATCGACGAACTGGGCACCTGCCGTTACCTCGAGTCGGCGACCAACATTCTGCTCGTCGGCCCGCCGGGCACCG GGAAGACGCACCTGTCGGTGGGGTTGGCAAGGGCGGCAGCGCATGCCGGGTATCGGACCTACTTCACCACTGCCGCCGAT CTGGCAGCTCGGTGCCATCGCGCGGCGATTGAGGGGCGCTGGGCCACCACCATGCGGTTCTACGCCGGCCCCACCCTGTT GGTGATCGATGAACTGGGCTATTTGCCGCTGCCTGCCGAGGCCGCCTCGGCGTTGTTTCAGGTTGTCTCCCAACGGTATT TGAAAACCAGCATCGTGATCACGACCAATCGTGGTGTCGGATCCTGGGGAGAGATCCTCGGCGACACCACCGTGGCCGCC GCCATGCTCGACCGCCTCCTGCACCGCTCGGTGGTCATCAACCTCGACGGCGAGTCCTACCGCCTTCGCGACCACCAGGC CGCCGCGGAAACCCTCCGCCGCGCCACCACCGGCACCCGCCAAGCACTACACTGA Protein sequence : MTPTPRTAKNTATVTEEPPSTAASRYQKLRSHLAELKLHAAAAALPAVLDQASAENLSLTVALERLLAVEVEASTARRLA GRLRFACLPTPATLDDFDVDAAAGIDRKLIDELGTCRYLESATNILLVGPPGTGKTHLSVGLARAAAHAGYRTYFTTAAD LAARCHRAAIEGRWATTMRFYAGPTLLVIDELGYLPLPAEAASALFQVVSQRYLKTSIVITTNRGVGSWGEILGDTTVAA AMLDRLLHRSVVINLDGESYRLRDHQAAAETLRRATTGTRQALH |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAB46598.1 | IS100 transposase | Not tested | HPI | Protein | 5e-31 | 42 |
| s0036 | CAD33774.1 | ORF B protein | Not tested | PAI I 536 | Protein | 5e-31 | 42 |
| y1093 | CAD42087.1 | OrfB protein of IS100 transposase | Not tested | PAI II 536 | Protein | 5e-31 | 42 |
| orfB | CAE85183.1 | OrfB protein, transposase, IS100 | Not tested | PAI V 536 | Protein | 5e-31 | 42 |
| api84 | CAF28558.1 | putative transposase | Not tested | YAPI | Protein | 5e-31 | 42 |
| YPTB1586 | YP_070114.1 | transposase/IS protein | Not tested | HPI | Protein | 7e-31 | 42 |
| y1093 | CAC43411.1 | IS100 transposase; transposase ORFA | Not tested | PAI III 536 | Protein | 5e-31 | 42 |
| unnamed | CAA21402.1 | - | Not tested | HPI | Protein | 7e-31 | 42 |
| y1093 | CAD66188.1 | transposase Orf B, insertion element IS100 | Not tested | PAI III 536 | Protein | 7e-31 | 42 |
| aec58 | AAW51741.1 | Aec58 | Not tested | AGI-3 | Protein | 5e-31 | 42 |
| YPO1901 | YP_002346891.1 | transposase/IS protein | Not tested | HPI | Protein | 7e-31 | 42 |
| y2410 | NP_669717.1 | transposase/IS protein | Not tested | HPI | Protein | 7e-31 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| MSMEG_1858 | YP_886224.1 | transposition helper protein | VFG1515 | Protein | 3e-31 | 42 |
| MSMEG_1858 | YP_886224.1 | transposition helper protein | VFG1627 | Protein | 3e-31 | 42 |
| MSMEG_1858 | YP_886224.1 | transposition helper protein | VFG1606 | Protein | 3e-31 | 42 |
| MSMEG_1858 | YP_886224.1 | transposition helper protein | VFG1663 | Protein | 4e-31 | 42 |
